- Clone 'cima017h16' >
- Transcript 'KH2012:KH.C8.476.v3....'
Transcript Model
Transcript Id
KH2012:KH.C8.476.v3.A.SL3-1
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
KhC8 [3,155,488 / 3,160,676]
Amino acid sequence
Length: 603
>KH.C8.476.v3.A.SL3-1
TGDEGLDFIRLKPPRGHRKRLPQLDGYVEFYHQKKWRKVCSTGWDLNTASVICGQLGFPR
AEEITDRSQYLARARKKHYYWLSNITCIGTENKVSQCKFQNVDISAYNTCPGEPLITRCI
PGPKYARGNFKKGGKRRKHRKHNVLRQETIRLKVGSAEGEGRLEVMRSGRWGTVCHRGWN
LWAANVACRELGFGTAKREIINSYFGAGHGPIWLTDLNCRGNETQLSDCQHGYISTSAEG
YEDSELTECNHEHDAGVACYVPQFNANQRIRLVGGRNPMEGRVEVKIRKRWGAVCSNDWT
MKEAMVVCRQLGLGFALHSLKDVYFFPGTENITEIAMTGIHCKGDELALQFCPSDGRSLS
VCGDPHRSSTPFAGVICTELSPDLMQDIPLLQQSLHLEDRPLHNLYCASEEGCLSPSAAK
MDWPYGSRRLLRFSTRVWNRGRADFRPARSQDQWIWHQCHGHYHSMAEFTHYDILDLNFT
KVAEGHKASFCLEDSECSPGVSPRFDCDQPGGGVQGIAVGCADNYQYNIDCQWIDISDIT
AGNYLIRIRVNPGTLVAESDFGNNEVICNLQYDGSRVWAWNCHIPDDFDPEILIRYYTSE
VYP
Nucleotide sequence
Length: 1,860
>KH2012:KH.C8.476.v3.A.SL3-1
ACTGGGGACGAAGGTCTTGATTTTATCCGTCTTAAACCGCCAAGGGGGCACAGAAAACGT
CTTCCACAACTAGACGGTTACGTAGAGTTTTACCATCAAAAGAAATGGAGGAAAGTTTGC
TCAACTGGGTGGGACTTGAACACGGCATCTGTGATTTGTGGACAGCTAGGATTTCCTAGA
GCAGAGGAAATTACGGATAGGAGCCAATATTTAGCCAGGGCAAGAAAAAAGCATTACTAT
TGGTTGAGCAACATTACATGTATAGGCACTGAGAATAAAGTGTCCCAATGCAAGTTTCAA
AATGTGGATATAAGTGCATACAACACCTGCCCTGGTGAACCACTGATAACAAGATGTATT
CCTGGTCCAAAGTACGCAAGAGGGAATTTCAAAAAAGGAGGAAAAAGAAGAAAACACAGA
AAACATAATGTCTTGAGGCAGGAAACGATCCGATTAAAAGTTGGATCAGCAGAAGGAGAG
GGCAGGTTAGAAGTGATGAGGTCTGGTAGATGGGGAACTGTTTGTCATCGCGGATGGAAT
TTATGGGCAGCTAATGTCGCATGTAGGGAGCTTGGGTTTGGGACGGCTAAGAGGGAAATT
ATTAATTCATATTTTGGTGCAGGACATGGTCCAATATGGTTGACCGATTTGAATTGTCGT
GGTAACGAGACACAGTTGAGCGATTGTCAACATGGTTACATATCCACAAGTGCTGAGGGG
TATGAGGATTCAGAACTAACAGAATGCAATCATGAACATGATGCTGGCGTGGCTTGCTAT
GTTCCACAGTTCAATGCAAATCAAAGGATACGGCTGGTTGGAGGGCGTAACCCAATGGAG
GGTCGAGTAGAAGTGAAGATAAGGAAAAGGTGGGGAGCGGTGTGTAGTAATGATTGGACA
ATGAAAGAGGCAATGGTTGTGTGTCGACAACTTGGTCTCGGGTTTGCTCTTCATTCTCTA
AAGGATGTTTATTTCTTCCCTGGAACTGAAAACATCACCGAGATTGCAATGACTGGCATC
CACTGTAAAGGAGATGAACTAGCCTTACAGTTTTGTCCAAGTGATGGGCGAAGTTTGTCA
GTGTGTGGAGATCCACACCGATCCTCAACTCCATTTGCTGGAGTTATTTGCACTGAATTA
TCCCCTGATCTGATGCAGGATATTCCTCTTCTACAACAATCTCTTCATTTAGAAGATCGA
CCGCTGCATAACTTGTATTGTGCATCTGAGGAAGGTTGTCTATCGCCCTCTGCTGCAAAG
ATGGATTGGCCTTATGGATCTCGTCGACTCCTCCGTTTCTCAACAAGAGTTTGGAACAGA
GGAAGAGCCGACTTCCGACCTGCGAGGAGCCAGGACCAGTGGATCTGGCATCAGTGCCAT
GGGCATTACCACAGCATGGCTGAGTTCACACATTACGATATACTTGATCTTAACTTCACC
AAAGTAGCTGAAGGACACAAAGCAAGCTTCTGTTTGGAAGATAGCGAATGTTCCCCGGGT
GTTTCTCCACGTTTTGATTGCGATCAGCCTGGTGGAGGGGTGCAAGGTATTGCTGTGGGC
TGTGCAGATAATTACCAGTACAACATAGATTGCCAGTGGATTGACATTTCTGATATTACT
GCTGGAAACTACTTAATAAGAATTCGTGTCAATCCTGGTACTTTGGTTGCGGAATCCGAT
TTTGGAAACAACGAGGTTATTTGTAATTTACAATATGATGGAAGTCGAGTTTGGGCATGG
AATTGTCATATACCTGATGACTTTGACCCAGAGATATTGATACGTTATTACACATCGGAA
GTCTACCCTTAATTCTTTCATCTTTTACACTTTGTATTCTTGGAATAAAATTCCTTTGTG
| SMART |
SRCR-like_dom (IPR017448) - T[9-120] 2.1E-17 - T[150-260] 6.9E-37 - T[270-378] 8.4E-36 |
| ProSiteProfiles |
SRCR (IPR001190) - T[9-120] 17.992 - T[150-260] 29.205 - T[270-378] 26.517 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[15-121] 3.8E-21 - T[143-263] 2.4E-33 - T[264-382] 7.9E-28 |
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[24-121] 6.93E-21 - T[149-260] 3.92E-31 - T[268-383] 2.35E-29 |
| Pfam |
SRCR (IPR001190) - T[24-106] 4.9E-19 - T[155-259] 4.2E-25 - T[273-377] 4.5E-22 |
| PRINTS |
SRCR (IPR001190) - T[150-166] 9.6E-13 - T[169-180] 9.6E-13 - T[184-194] 9.6E-13 - T[248-260] 9.6E-13 |
| ProSitePatterns |
SRCR (IPR001190) - T[155-192] . - T[275-312] . |
| Pfam |
Lysyl_oxidase (IPR001695) - T[382-584] 2.6E-91 |
| PRINTS |
Lysyl_oxidase (IPR001695) - T[391-415] 2.1E-35 - T[436-457] 2.1E-35 - T[458-478] 2.1E-35 - T[508-530] 2.1E-35 - T[531-550] 2.1E-35 - T[551-568] 2.1E-35 - T[569-587] 2.1E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 43.878 % | 512 | 8.13E-174 |
| LOXL3_HUMAN | 45.785 % | 530 | 0 |
| LOXL4_HUMAN | 44.205 % | 519 | 5.77E-177 |