- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.C8.482.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.482.v1.A.SL2-1
Possible name(s)
NKX2-3; NKX2-5; NKX2-6
Gene model
Location
KhC8 [4,055,579 / 4,061,421]
Amino acid sequence
Length: 629
>KH.C8.482.v1.A.SL2-1
TLFVRRMIPSPVGSTPFSVKDILNLERHQMSCQSSADDRDTPHVVNGYPVSCNDSIKSED
TQVLDMHSIYHHSSMEATQQASGELVKGRFEKLSKPHSRQIETNNMAASDSQFDMFSQNE
NAKYSKGAIDTRYAEATNTADTAASNLLHFSQNFHQIPYGESRALVAPFDMPRYGGEYFS
PTSNYSGGYTHPYDNPPSNVEASRSSSFHSQQFTKPNDDVISTTHSTSSATAGNFYHRPA
NNFEPVREPGLERCPDNGDEFYTKTESPFPAFNQQHQPTPQSEHHSMPSYDEMNEKMYTD
QTSETDITNNSMFDSSSSEAVVVDFPSPSGSPNKQHEDGRFGGSCTDESLPRTFSAADIR
QDESVTQVTDSEKSDNVSTCSTSPEETEKKKTEDDTLKSRHRTRRKPRVLFSQAQVFELE
RRFKQQRYLSAPEREHLAQILKLTSTQVKIWFQNRRYKCKRMRQDKTLELASIGPPRRVA
VPVLVRDGKSCLGGPGQVSHNAAPYNVTVTRYHNYPSSYSSCGYNSYPPNPPGYGPSAAA
AAAVAGAAAAAYGNAATNGYNGFPPSMNGGQPGASPYPTPGLHQQHPPSMGVGNSPFQTS
TVPTGHHMSQGGLHHHTPTDYMYKLGLCT
Nucleotide sequence
Length: 2,480
>KH2012:KH.C8.482.v1.A.SL2-1
ATCACTTCTCAAGTATAGTTTAGAAATATTACTGCTGAAACCTAAACGCTATTTGTACGA
AGGATGATTCCTAGTCCGGTTGGATCGACTCCATTTTCGGTTAAAGACATTTTGAACCTG
GAACGTCATCAAATGTCATGTCAAAGCAGCGCCGATGACCGAGACACGCCCCATGTGGTC
AATGGCTATCCCGTGTCGTGTAATGACAGCATAAAAAGCGAAGATACTCAAGTGCTTGAT
ATGCATTCGATATACCATCACAGTTCGATGGAGGCCACCCAGCAAGCATCAGGTGAATTA
GTTAAAGGAAGATTCGAAAAGTTGAGCAAACCGCACTCAAGACAAATCGAAACAAACAAT
ATGGCTGCCTCCGATTCACAGTTCGACATGTTTTCGCAAAATGAAAACGCAAAATATTCT
AAGGGGGCAATAGACACAAGGTATGCAGAAGCAACAAACACAGCAGACACGGCAGCGTCG
AACCTTTTGCATTTTTCTCAAAATTTTCACCAAATTCCGTACGGGGAAAGTAGGGCACTG
GTGGCGCCATTCGACATGCCTCGTTACGGTGGGGAGTATTTCAGTCCGACAAGCAACTAC
AGTGGAGGTTACACTCACCCCTATGACAACCCACCTAGCAATGTTGAAGCCTCACGATCG
TCGTCGTTTCATTCACAGCAGTTTACGAAACCAAACGACGACGTTATTAGTACAACACAC
TCAACGTCCTCTGCCACAGCAGGAAACTTTTACCACAGACCGGCGAACAACTTCGAGCCT
GTGAGAGAGCCAGGGCTGGAGAGATGTCCTGACAACGGAGACGAATTTTACACCAAAACT
GAATCTCCGTTTCCCGCATTCAACCAACAGCATCAACCCACACCACAAAGCGAGCATCAC
AGCATGCCCAGCTACGACGAAATGAACGAGAAGATGTACACCGACCAGACATCCGAAACC
GATATAACCAATAACTCAATGTTCGATTCGTCAAGTTCGGAGGCGGTGGTCGTCGATTTT
CCATCACCATCCGGATCGCCAAACAAACAACATGAAGACGGAAGATTCGGAGGATCCTGT
ACGGATGAATCACTTCCGAGGACTTTCTCCGCCGCCGACATCCGGCAGGATGAATCAGTT
ACTCAAGTCACGGATTCGGAAAAGTCGGACAACGTCAGCACATGTAGCACTAGCCCCGAA
GAAACTGAAAAAAAGAAAACAGAAGATGACACGCTAAAATCCCGACACCGGACCAGGCGA
AAACCGCGTGTGCTGTTCTCCCAGGCACAAGTATTTGAGCTTGAGCGAAGATTTAAACAA
CAAAGATACTTGTCTGCTCCGGAAAGAGAACATCTGGCCCAGATTTTAAAACTGACTTCC
ACCCAGGTCAAGATCTGGTTCCAAAATCGTCGATACAAATGTAAACGAATGCGACAAGAC
AAAACCTTAGAGCTGGCCAGTATTGGACCTCCACGAAGAGTTGCAGTTCCTGTTTTAGTT
CGCGACGGGAAGTCATGTCTCGGTGGGCCTGGTCAAGTATCACATAACGCGGCTCCATAC
AATGTGACTGTTACACGCTACCACAATTACCCAAGTTCATATAGCTCTTGCGGTTATAAC
TCCTACCCCCCTAACCCACCCGGTTACGGGCCAAGCGCTGCCGCAGCAGCAGCTGTAGCA
GGAGCGGCCGCTGCAGCATACGGGAACGCTGCTACGAACGGTTATAACGGATTTCCGCCG
AGCATGAACGGTGGACAGCCCGGTGCGAGCCCCTATCCTACTCCAGGGCTGCACCAACAG
CACCCACCCTCTATGGGGGTCGGGAATTCACCGTTTCAGACCTCGACTGTACCTACAGGC
CACCATATGTCTCAAGGGGGGTTGCACCATCACACACCAACGGACTATATGTATAAGCTT
GGGCTGTGCACGTGATTTAAACTGATATATTGTGCATATATTGTTGCTGTGCATGTTCGT
GCAATGTACCATGTTCCGCTACGACAAATAATCATGCCAAACCTTTAATTTGGTACTATT
ATACCAATTTCTCGGCGACTCGGTACAACTTTTATTTATGTCTACTTTTAAACCCTGGAC
TTAGGCTTTCAACTGGGGAAACTAGGACTGCCATTTTAAACTCTTTAATGCTACTTAGTA
TATTGCTTTTCATTTATGCAGTGTTTTTAAAAAGTTATATCTCGATATCCCGTAACACGT
TTGTTTATTTTTACTTCGTACTATGCTGAGTCTACTCTACAATGAGCTTCACATGACTTG
GCAAAACCAATCTAGGCTTAATTATGTAACAATACTTATTGTTTCGCACTCTCAGCTAAA
TTAAAACGTACCTCCCGAATTAAACTTATACAGTACACAGCTGCATATTACTTATAATGT
GATTTTGGACGTGTGCAATTATGTTGGTCGGCTGCTGGTTTAAAAAGTCGAATTTCTGAA
TAAACTTATTTTGCCACATT
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[398-463] 3.29E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[402-462] 20.099 |
| SMART |
Homeobox_dom (IPR001356) - T[404-466] 3.0E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[405-461] 1.4E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[405-463] 3.17602E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[426-437] 1.1E-5 - T[441-451] 1.1E-5 - T[451-460] 1.1E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[437-460] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX26_HUMAN | 60.606 % | 171 | 2.2E-48 |
| NKX25_HUMAN | 50.455 % | 158 | 1.92E-43 |
| NKX23_HUMAN | 57.988 % | 154 | 1.07E-41 |