Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.554.v1.A.SL1-1

Possible name(s)

BRIX1; IMP4; RPF2

Gene model

KH2012:KH.C8.554

Location

KhC8 [1,850,061 / 1,852,249]

Sequences

Amino acid sequence

Length: 313

>KH.C8.554.v1.A.SL1-1
LLFSVQITIMAQKRKSKERNNRKTKLQKLNPEEPKEEPEEEVTNELTDMPTLTKGRWKNK
QKVLVFTSRGITYKGRHLVNDLRNLMPHTKTDVKMDRKSDLLMVNEICEIKSCNKCIFLV
GKKKRDVYMWISNVPHGPSALFHVEYLNMMEELKFTGNCLKASRPILSFDSKFDDSPHMK
LLKELFIQVFGTPNFHPKSQPFVDHVFTFSLMDGKIWFRNYQIVEENGELVEIGPRYTMT
LSRILSGSFGGPILYINPDYQSPNLVRHLEKKSSTKYVDNKAAKIDKKMRRSDKTFAADE
TDQVFDTNLTAES

Nucleotide sequence

Length: 1,003

>KH2012:KH.C8.554.v1.A.SL1-1
TTGTTGTTTAGTGTTCAAATCACCATTATGGCGCAAAAACGTAAAAGTAAAGAAAGAAAC
AACAGAAAAACGAAGCTTCAAAAATTAAACCCTGAAGAACCAAAAGAAGAACCAGAAGAA
GAAGTCACTAATGAATTGACGGATATGCCAACGCTAACCAAGGGTCGATGGAAAAATAAA
CAGAAAGTCTTGGTCTTCACATCCAGAGGAATCACCTACAAAGGAAGGCATTTGGTAAAT
GATCTGAGGAACTTAATGCCACACACTAAGACAGATGTAAAGATGGACCGAAAGAGTGAC
TTGCTCATGGTAAATGAGATTTGCGAGATTAAAAGTTGCAATAAATGTATTTTTCTTGTT
GGCAAAAAGAAGAGAGATGTTTATATGTGGATATCTAATGTACCTCATGGACCTTCTGCA
TTGTTTCATGTGGAATATTTAAACATGATGGAAGAACTGAAGTTTACTGGAAATTGTTTA
AAAGCATCAAGACCAATTCTATCTTTTGATTCGAAATTTGATGATTCTCCGCACATGAAG
TTGTTAAAAGAATTATTCATTCAAGTTTTCGGAACTCCAAATTTTCATCCTAAGAGTCAA
CCTTTTGTTGACCATGTGTTCACATTCAGTTTGATGGATGGCAAGATCTGGTTTCGTAAT
TATCAGATTGTGGAAGAAAATGGAGAACTAGTTGAAATTGGTCCCAGATACACGATGACA
TTATCAAGGATATTATCAGGCAGCTTTGGTGGTCCAATTCTCTATATTAATCCAGACTAC
CAGTCTCCAAATCTGGTTCGACATTTAGAAAAGAAAAGCTCCACAAAGTATGTTGATAAT
AAAGCTGCGAAGATAGACAAGAAAATGAGACGTTCAGATAAAACGTTTGCAGCTGATGAA
ACTGACCAAGTGTTCGATACCAATTTAACTGCCGAATCATGAAATAAATTTCTTTTTAAA
ACTTAGTGAAATTTTAATGCGTGTCGCAAAAAATATGAAGATA

InterProScan

PANTHER	BRX1 (IPR026532) - T[15-308] 3.2E-119
ProSiteProfiles	Brix (IPR007109) - T[61-250] 31.859
SMART	Brix (IPR007109) - T[64-244] 1.9E-49
Pfam	Brix (IPR007109) - T[68-242] 2.0E-36

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BRX1_HUMAN	57.143 %	330	1.02E-112