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  1. Clone 'cibd083d13' > 
  2. Clone 'cien53493' > 
  3. Transcript 'Cisavi.CG.ENS81.R49....' > 
  4. Clone 'ciad064b10' > 
  5. Transcript 'KH2012:KH.C8.571.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.571.v1.A.SL1-1

Possible name(s)

TRPC3; TRPC4; TRPC5

Gene model

KH2012:KH.C8.571

Location

KhC8 [1,912,382 / 1,924,491]

Sequences

Amino acid sequence

Length: 1,063

>KH.C8.571.v1.A.SL1-1
IWSLKHNGYIKNQNTMSLPKHYLLAEEDESTLSLTTQRHIRSPRNTSNSIGKMAASSSTL
TLDRRMQTNGKDMNSVYSTLPRQSKQHQPSAANYAKIKSLATFTNIYLNNKELGIAEEEL
RYLKAVESGDLDEVRAILNANDVLSSDSEDDEVKPTANNRPGENDVRAQNNNPTPIPLIV
TSQTSEESAIVVEDDSAANVAKELDKKDSLEENSTCVKSGNSAVTPDNVVLEMHEVDEKR
KPTKPSFKHIAHPSKWQVKHGQKSSPVTPLPVVMVTPEQSKTDRLKKRETLKKLVGLLPS
KNELRFNKNCRDQWGRSALFIAMLHLNTEMMELLLEYKVEIDECLYHAIDFGYYDVVELF
MKYDKKRNQVITGDDSFYPPGLTPIQLAAHKNDYVMLKILHSNGFKISNETAKKRIFSRK
PNRTYNTLEKPMLKTVLERAWDATNNDILYYRARASPAYMVMMFTENPDDAHEHWDMLEN
LFSLYKKLKKKATDEPSAATLYRQLASQVEDFACDLLSEVRSPTDLTDLLRFDPPGHDQL
SIHRHYLNPVERACEVRMKSFVAHENCQLALSTLRQGTLFECDNGWRPFIVRTILAFLFP
IISLAFIIAPNSKPGRLLRNPMVNLSCHIASEISFLLLMIIRLILLTNAKCDCLGQKPGA
VDYIVFVWVIAKGYRYFNRLRVSPTIQFMTNVWNMNDSGMIFLSLVIAVMTIVDTQVTKG
LMRSRNLNVTCSANLKSYLPAPDGFDLCNRETWELEFAWPVYISEVCYALIYILIFVRAM
ELLYIDRTLGPLQLSLDKMMVDIFRFLVLFAVTFMAFAFGMTQLYWAYGTPRLFRMNVTE
REVCGDTFDSSSFTCYPVYSSIIDSILEQYWTLYGYGYGAEPTAAVKVPGQSTITLPSGL
ILSMVFHMWAVVVMLNMLIAMMSHSFDRVRDNAEIEWKYHRSGMWMRYVKVNVCPRPCPM
NLLPTVQSIVACCAYFKAKCLCRCGRYDPDSETPERRNARKQVSSDSVKENKRYRQAISR
ISTRYLRRYLLPDFKHDVGDPNRSAKKAYGHRGSIISSDTSSS

Nucleotide sequence

Length: 4,046

>KH2012:KH.C8.571.v1.A.SL1-1
GATTTAGTAGCGTGTTTAAATCTGGTCATTAAAACACAATGGCTATATTAAGAACCAAAA
CACGATGTCTTTGCCAAAGCATTACTTATTGGCTGAGGAAGACGAATCAACTTTAAGTCT
AACCACCCAAAGACACATACGATCACCAAGAAATACATCAAACTCAATTGGGAAAATGGC
GGCGAGCAGCAGTACATTAACGTTGGACCGCAGGATGCAAACAAACGGTAAAGATATGAA
CAGCGTGTACAGCACATTACCACGACAAAGCAAGCAGCATCAGCCAAGCGCAGCAAATTA
TGCGAAAATCAAAAGCTTAGCGACCTTTACCAATATTTATCTCAACAACAAAGAACTTGG
CATCGCCGAAGAGGAACTTCGTTACTTAAAAGCGGTGGAAAGCGGTGATTTGGACGAAGT
CCGAGCCATTTTGAACGCCAACGACGTCTTATCTTCTGACAGCGAAGACGACGAAGTTAA
GCCAACCGCAAACAATCGACCAGGAGAAAATGACGTGAGGGCACAAAATAATAACCCAAC
GCCGATCCCATTAATAGTAACAAGCCAAACCAGCGAAGAATCCGCGATCGTAGTCGAAGA
CGATTCGGCTGCAAACGTAGCGAAAGAACTTGATAAGAAAGATTCGCTTGAAGAGAATTC
GACATGTGTTAAGTCGGGAAACTCAGCTGTTACGCCCGATAATGTCGTTCTAGAAATGCA
CGAGGTCGACGAAAAAAGAAAACCAACCAAACCTTCGTTTAAACATATTGCGCACCCATC
AAAATGGCAAGTCAAGCATGGCCAGAAGTCGTCGCCCGTTACCCCTTTACCAGTAGTCAT
GGTAACGCCGGAGCAATCAAAAACAGATAGACTTAAAAAGCGAGAAACACTAAAGAAATT
AGTTGGTCTTCTCCCTTCGAAAAATGAACTCCGGTTTAATAAGAACTGTCGGGACCAGTG
GGGAAGATCTGCTCTCTTTATAGCAATGCTTCATCTCAACACGGAGATGATGGAACTGCT
TCTTGAATACAAGGTGGAAATTGACGAGTGTCTGTACCACGCTATTGACTTCGGTTACTA
CGATGTCGTGGAGTTATTCATGAAATATGACAAGAAACGAAATCAGGTTATAACCGGTGA
CGACTCGTTTTATCCGCCAGGGCTTACTCCAATACAGTTGGCTGCCCACAAGAACGATTA
TGTCATGCTGAAGATTTTACACTCCAACGGTTTTAAAATCAGCAACGAAACCGCAAAGAA
ACGAATTTTCTCACGCAAGCCAAACCGGACTTACAACACCTTAGAAAAGCCAATGCTGAA
AACGGTTCTTGAACGAGCATGGGACGCTACCAACAACGATATACTGTATTACCGGGCCAG
AGCAAGCCCGGCTTACATGGTTATGATGTTTACTGAAAACCCAGACGATGCACACGAGCA
CTGGGACATGCTGGAGAATCTCTTCTCGCTGTACAAGAAGTTAAAAAAGAAAGCAACTGA
CGAACCATCCGCAGCAACGTTGTACAGGCAGCTTGCGTCACAGGTTGAAGACTTCGCATG
CGACCTGTTGAGTGAAGTCCGTTCGCCCACCGATCTCACCGACCTACTCCGTTTCGATCC
ACCAGGCCACGACCAACTGTCGATCCATCGTCATTACCTCAACCCAGTAGAACGAGCATG
TGAAGTGAGAATGAAAAGTTTTGTCGCACACGAAAATTGCCAACTCGCGCTCTCCACCTT
GCGGCAGGGAACATTATTCGAATGTGACAATGGGTGGCGCCCATTCATCGTGCGAACAAT
TCTGGCGTTTCTGTTCCCGATTATCAGCCTTGCTTTTATCATTGCCCCGAATTCCAAGCC
TGGTCGTCTTCTTCGAAACCCGATGGTTAATTTAAGCTGCCACATCGCATCCGAAATTTC
TTTCTTGTTGCTCATGATCATTCGACTTATTCTGCTCACCAACGCAAAGTGCGATTGCCT
TGGACAGAAACCAGGCGCAGTCGATTACATTGTATTTGTATGGGTGATTGCGAAAGGCTA
TAGATATTTCAACCGACTTCGAGTTTCACCGACCATACAGTTCATGACCAATGTTTGGAA
CATGAATGACAGCGGGATGATATTTCTATCTTTAGTTATCGCTGTTATGACGATAGTGGA
CACACAAGTCACAAAAGGTCTTATGAGGAGTAGGAACTTGAACGTAACGTGTTCTGCAAA
TCTCAAATCTTACCTACCAGCTCCTGACGGTTTTGATCTGTGCAATAGAGAGACATGGGA
GTTAGAATTTGCTTGGCCTGTTTATATATCAGAGGTCTGCTATGCTCTCATCTATATACT
GATATTTGTACGAGCCATGGAACTGCTATATATTGACCGGACTCTGGGCCCCCTTCAACT
GTCCCTCGATAAAATGATGGTTGACATTTTTCGATTTCTCGTTCTTTTCGCTGTTACTTT
CATGGCATTTGCGTTCGGAATGACTCAGCTATATTGGGCGTACGGCACGCCCCGTCTTTT
CCGAATGAACGTTACTGAAAGAGAAGTTTGCGGCGATACATTTGACAGCTCGTCCTTCAC
TTGCTATCCTGTCTATTCCTCTATCATTGATTCAATCCTGGAGCAGTATTGGACCCTATA
TGGTTATGGCTACGGTGCCGAACCAACTGCTGCAGTCAAAGTTCCGGGACAGTCGACCAT
AACTCTACCATCTGGCCTCATTCTCTCAATGGTGTTTCACATGTGGGCTGTAGTGGTCAT
GCTCAACATGCTGATCGCTATGATGTCGCATTCCTTCGATCGCGTTCGTGACAATGCTGA
GATTGAATGGAAGTATCATAGATCTGGGATGTGGATGCGTTATGTGAAAGTTAATGTTTG
CCCCAGACCTTGTCCAATGAATCTTCTACCCACTGTACAAAGCATAGTAGCATGCTGTGC
TTATTTCAAGGCAAAGTGTCTGTGTCGTTGTGGAAGGTATGACCCAGATTCTGAAACACC
AGAGCGACGAAATGCAAGGAAACAAGTTTCTTCCGATAGCGTGAAAGAAAACAAAAGATA
CAGACAAGCCATAAGCCGAATATCAACTAGATACCTTCGCCGCTATCTCCTACCCGACTT
TAAGCATGATGTAGGTGACCCAAACCGATCTGCAAAGAAAGCTTACGGGCACCGAGGAAG
TATTATTAGCTCGGATACAAGTAGCAGCTAAACAGTTCAAATTCAAGTTCAAAAAGCCCC
AAACGCAATTGCCATTCATATTTTCTTATAGCATTTATATTAGGCCTTCAATTGCTCTTT
CTATAATTGTTTTCTTTTATAGGCAAAGTTTGTAAATTTCTTTGTGTAACTCTGTTCAAG
TCGTTTTAAAAGACACGAGGTTGCTTCCACCATGCACACAGTTAAATTATGTACAACCAC
CACTGCGTTATCTATGTTCGTTCTCACTGTTCTGTCACTTACTGTACCTTGCCTTAACCT
TCTCAAGTTACTGCACTTTCCTGTTGGATCTTATTCTTCAGAGTCTCGTTCGTTCAAAAA
CATTTTACCCCAAATTAAGCACTGTAGGTGCCTTGAATGTTTAAAATCGTCTCTTGGTAC
TTGCATGTTATCGGTTGGGGTAAGATGGTCCGTATTTTCATTCTCTTTTATCGTCCCATT
TGGTAGTAAACAAGGGATTTTTACAAAATTGTATAACCGTATCAATACGACTCTAAATAA
GCATTGTTTTTGTTAAAACCACATATGGGACATAATGTGCTAACGGTATCCATCTTACCC
TCAACCTAGTATAAATATAAAAAATGAAGCCATTTTTTCTAAAACCCATCAAATTCATTT
TGTTACATTGTGTTAGAAATCGTTGTTCATAACACCGATTATAAAAATTACGTCCAAGTA
TATAAAACTTATGTTTGTATTTATGTGTTTTTTTTATGAAATTATTTCAAATTACTGATA
TAATTTATATGTGATGAGTTGTGTATTACTTTGGTGACTTATTTTTGCTCCCGTGGAATT
GATTTCATTAAAATTCTTTACTATAC

InterProScan

PANTHER
TRPC_channel (IPR002153) - T[116-145] 3.5E-149 - T[290-1026] 3.5E-149
Gene3D
Ankyrin_rpt-contain_sf (IPR036770) - T[287-458] 1.0E-12
Pfam
Ankyrin_rpt-contain_dom (IPR020683) - T[290-364] 4.3E-6
SUPERFAMILY
Ankyrin_rpt-contain_sf (IPR036770) - T[304-407] 3.73E-13
CDD
Ankyrin_rpt-contain_dom (IPR020683) - T[309-415] 7.20016E-11
SMART
Ankyrin_rpt (IPR002110) - T[314-343] 0.052 - T[344-369] 1800.0 - T[380-409] 9.9
Pfam
Ion_trans_dom (IPR005821) - T[632-933] 4.3E-13
PRINTS
TRPC_channel (IPR002153) - T[904-925] 3.7E-8 - T[926-939] 3.7E-8 - T[955-968] 3.7E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRPC3_HUMAN 26.811 % 208 8.79E-56
TRPC5_HUMAN 27.582 % 264 5.49E-74
TRPC4_HUMAN 25.846 % 218 1.19E-58





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