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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.611.v2....'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.C8.611.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.611.v1.A.nonSL5-1

Possible name(s)

SNED1

Location

KhC8 [6,126,123 / 6,129,970]

Sequences

Amino acid sequence

Length: 491

>KH.C8.611.v1.A.nonSL5-1
VKMFVLVLLSFLLSSFNSANAACVNNFQCPLNAECRQGTCVAVGGVTTTLIPPEQNRGAC
TPNPCQNDCRCVPSCKHASGFYCTSPSGFLGKTCTIPAPSLSCSENTITISVSAQLVREY
SMSTTGSYIYMGQGPTSLLQGGTAMSSACAVSSPVNGYYTISIPLPFTGCGTRVSGPTTG
TVNTNSFTNEIWLNTNGVLFDVPIPIFRWTCSYTENYSIVTRLQPTVEPLRIVKGDTVMR
QAVAELCKVQSACPGACPPLFSVKEGAAYTVSEMIHLTISLQTPTMTGQALYLYSLTLSC
SSTPGSSDAVSLVTAGCSSNILSTTFGRNGQSGTVCVSFRVPRMMGCNMMYIHGSMKSAV
PSTLSACPGADGVILRSASSVPDTDDVNNTDVRKRRSAVTTTTNDDDNTTAIVSVGPIFI
FPGSPGTPQSELFPGAAVLPESDDSLPEGVPTSPLAKQSMIIVTTIVVVATLLLICIVLY
VYVTRARNVHK

Nucleotide sequence

Length: 1,712

>KH2012:KH.C8.611.v1.A.nonSL5-1
TTATTGTCCTTTGTTACGTGTTAAGTTCTCGAAGCGCTTCGTTTTTGCTGAGTTAAAATG
TTCGTTCTCGTTTTGTTAAGTTTCCTGCTTTCGAGCTTCAACTCGGCGAATGCTGCTTGC
GTGAACAATTTCCAATGTCCGTTGAACGCTGAATGCAGGCAGGGCACTTGCGTTGCAGTT
GGTGGCGTTACTACTACATTGATCCCACCAGAACAAAACCGAGGGGCATGCACGCCCAAC
CCTTGCCAGAATGATTGCAGATGTGTGCCATCGTGCAAACACGCGTCGGGTTTCTATTGC
ACGAGTCCTTCCGGCTTTCTCGGGAAGACTTGCACCATACCCGCCCCGTCGTTATCCTGC
AGTGAAAACACGATCACTATTTCTGTATCTGCGCAGTTAGTTCGCGAATATTCCATGTCT
ACAACCGGTAGCTACATTTACATGGGTCAAGGTCCTACTTCTTTACTGCAAGGTGGCACC
GCAATGTCTAGTGCGTGTGCAGTATCCTCCCCTGTGAACGGCTACTATACGATTTCTATT
CCGCTCCCGTTCACTGGGTGTGGTACCAGAGTCAGCGGGCCCACCACCGGAACTGTTAAC
ACGAATAGCTTCACCAACGAAATCTGGTTGAACACGAACGGTGTTTTATTCGACGTCCCA
ATCCCCATCTTTCGATGGACTTGTTCCTACACCGAGAACTACTCCATCGTTACAAGACTG
CAACCAACAGTTGAACCACTACGCATCGTCAAAGGCGACACCGTAATGCGACAAGCGGTG
GCCGAACTTTGCAAAGTTCAATCTGCGTGCCCTGGTGCGTGTCCACCATTGTTCAGTGTG
AAGGAAGGAGCTGCTTACACGGTGTCGGAGATGATTCATCTCACTATATCGTTACAAACC
CCGACGATGACCGGCCAAGCTTTATACTTGTACAGCCTGACCCTTTCTTGCTCAAGCACC
CCAGGTTCCTCTGATGCGGTTTCGTTGGTCACCGCGGGTTGTAGCAGCAACATATTGTCC
ACTACATTCGGTCGCAACGGTCAAAGCGGGACAGTGTGCGTATCATTCAGAGTTCCCAGG
ATGATGGGTTGTAACATGATGTACATTCACGGGTCGATGAAGTCTGCAGTTCCTAGCACA
CTTTCGGCTTGTCCAGGTGCAGACGGTGTTATCCTGCGCTCGGCTTCCTCGGTACCCGAT
ACCGATGACGTCAATAACACTGACGTCAGAAAGCGACGATCAGCTGTTACTACAACCACA
AACGATGACGACAACACGACTGCTATAGTGAGTGTTGGGCCCATCTTTATATTCCCGGGT
TCGCCAGGTACCCCGCAGTCCGAGCTTTTCCCTGGAGCGGCAGTGTTGCCGGAATCTGAC
GACTCCTTACCGGAAGGTGTCCCGACGTCTCCACTCGCCAAACAGTCGATGATTATCGTC
ACGACAATCGTCGTCGTCGCAACTTTATTGTTAATCTGCATTGTGTTGTATGTTTACGTC
ACACGAGCTCGTAACGTTCATAAATAAATAATTTATTAATTTCATACTTGTCATTTGTGG
AAGTTGAAAAGGGAAACTCTTAATTGCTTGGGTTAAACATTCAAAAACTTGTGCTTCTGG
AAAATCTTGTAAAATAGTTGGCAATTAAAAGTAGATATGGAAGTCGTTTCGGATAACTGT
CGCTGATACTATAATAAATACATTCTGACGTG

InterProScan

ProSiteProfiles
ZP_dom (IPR001507) - T[102-374] 11.997

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value