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TRANSCRIPT CARD

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  1. Region 'REG00000368' > 
  2. Transcript 'Cisavi.CG.ENS81.R16....' > 
  3. Transcript 'KH2012:KH.C8.611.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.611.v1.A.nonSL6-1

Possible name(s)

SNED1

Gene model

KH2012:KH.C8.611

Location

KhC8 [6,126,123 / 6,129,933]

Sequences

Amino acid sequence

Length: 491

>KH.C8.611.v1.A.nonSL6-1
VKMFVLVLLSFLLSSFNSANAACVNNFQCPLNAECRQGTCVAVGGVTTTLIPPEQNRGAC
TPNPCQNDCRCVPSCKHASGFYCTSPSGFLGKTCTIPAPSLSCSENTITISVSAQLVREY
SMSTTGSYIYMGQGPTSLLQGGTAMSSACAVSSPVNGYYTISIPLPFTGCGTRVSGPTTG
TVNTNSFTNEIWLNTNGVLFDVPIPIFRWTCSYTENYSIVTRLQPTVEPLRIVKGDTVMR
QAVAELCKVQSACPGACPPLFSVKEGAAYTVSEMIHLTISLQTPTMTGQALYLYSLTLSC
SSTPGSSDAVSLVTAGCSSNILSTTFGRNGQSGTVCVSFRVPRMMGCNMMYIHGSMKSAV
PSTLSACPGADGVILRSASSVPDTDDVNNTDVRKRRSAVTTTTNDDDNTTAIVSVGPIFI
FPGSPGTPQSELFPGAAVLPESDDSLPEGVPTSPLAKQSMIIVTTIVVVATLLLICIVLY
VYVTRARNVHK

Nucleotide sequence

Length: 1,675

>KH2012:KH.C8.611.v1.A.nonSL6-1
TTCGTTTTTGCTGAGTTAAAATGTTCGTTCTCGTTTTGTTAAGTTTCCTGCTTTCGAGCT
TCAACTCGGCGAATGCTGCTTGCGTGAACAATTTCCAATGTCCGTTGAACGCTGAATGCA
GGCAGGGCACTTGCGTTGCAGTTGGTGGCGTTACTACTACATTGATCCCACCAGAACAAA
ACCGAGGGGCATGCACGCCCAACCCTTGCCAGAATGATTGCAGATGTGTGCCATCGTGCA
AACACGCGTCGGGTTTCTATTGCACGAGTCCTTCCGGCTTTCTCGGGAAGACTTGCACCA
TACCCGCCCCGTCGTTATCCTGCAGTGAAAACACGATCACTATTTCTGTATCTGCGCAGT
TAGTTCGCGAATATTCCATGTCTACAACCGGTAGCTACATTTACATGGGTCAAGGTCCTA
CTTCTTTACTGCAAGGTGGCACCGCAATGTCTAGTGCGTGTGCAGTATCCTCCCCTGTGA
ACGGCTACTATACGATTTCTATTCCGCTCCCGTTCACTGGGTGTGGTACCAGAGTCAGCG
GGCCCACCACCGGAACTGTTAACACGAATAGCTTCACCAACGAAATCTGGTTGAACACGA
ACGGTGTTTTATTCGACGTCCCAATCCCCATCTTTCGATGGACTTGTTCCTACACCGAGA
ACTACTCCATCGTTACAAGACTGCAACCAACAGTTGAACCACTACGCATCGTCAAAGGCG
ACACCGTAATGCGACAAGCGGTGGCCGAACTTTGCAAAGTTCAATCTGCGTGCCCTGGTG
CGTGTCCACCATTGTTCAGTGTGAAGGAAGGAGCTGCTTACACGGTGTCGGAGATGATTC
ATCTCACTATATCGTTACAAACCCCGACGATGACCGGCCAAGCTTTATACTTGTACAGCC
TGACCCTTTCTTGCTCAAGCACCCCAGGTTCCTCTGATGCGGTTTCGTTGGTCACCGCGG
GTTGTAGCAGCAACATATTGTCCACTACATTCGGTCGCAACGGTCAAAGCGGGACAGTGT
GCGTATCATTCAGAGTTCCCAGGATGATGGGTTGTAACATGATGTACATTCACGGGTCGA
TGAAGTCTGCAGTTCCTAGCACACTTTCGGCTTGTCCAGGTGCAGACGGTGTTATCCTGC
GCTCGGCTTCCTCGGTACCCGATACCGATGACGTCAATAACACTGACGTCAGAAAGCGAC
GATCAGCTGTTACTACAACCACAAACGATGACGACAACACGACTGCTATAGTGAGTGTTG
GGCCCATCTTTATATTCCCGGGTTCGCCAGGTACCCCGCAGTCCGAGCTTTTCCCTGGAG
CGGCAGTGTTGCCGGAATCTGACGACTCCTTACCGGAAGGTGTCCCGACGTCTCCACTCG
CCAAACAGTCGATGATTATCGTCACGACAATCGTCGTCGTCGCAACTTTATTGTTAATCT
GCATTGTGTTGTATGTTTACGTCACACGAGCTCGTAACGTTCATAAATAAATAATTTATT
AATTTCATACTTGTCATTTGTGGAAGTTGAAAAGGGAAACTCTTAATTGCTTGGGTTAAA
CATTCAAAAACTTGTGCTTCTGGAAAATCTTGTAAAATAGTTGGCAATTAAAAGTAGATA
TGGAAGTCGTTTCGGATAACTGTCGCTGATACTATAATAAATACATTCTGACGTG

InterProScan

ProSiteProfiles
ZP_dom (IPR001507) - T[102-374] 11.997

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value