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TRANSCRIPT CARD

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  1. EST 'AHC0AAA20YP04_RM1' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Transcript 'KH2012:KH.C8.611.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.611.v1.A.nonSL7-1

Possible name(s)

SNED1

Gene model

KH2012:KH.C8.611

Location

KhC8 [6,126,123 / 6,129,971]

Sequences

Amino acid sequence

Length: 491

>KH.C8.611.v1.A.nonSL7-1
VKMFVLVLLSFLLSSFNSANAACVNNFQCPLNAECRQGTCVAVGGVTTTLIPPEQNRGAC
TPNPCQNDCRCVPSCKHASGFYCTSPSGFLGKTCTIPAPSLSCSENTITISVSAQLVREY
SMSTTGSYIYMGQGPTSLLQGGTAMSSACAVSSPVNGYYTISIPLPFTGCGTRVSGPTTG
TVNTNSFTNEIWLNTNGVLFDVPIPIFRWTCSYTENYSIVTRLQPTVEPLRIVKGDTVMR
QAVAELCKVQSACPGACPPLFSVKEGAAYTVSEMIHLTISLQTPTMTGQALYLYSLTLSC
SSTPGSSDAVSLVTAGCSSNILSTTFGRNGQSGTVCVSFRVPRMMGCNMMYIHGSMKSAV
PSTLSACPGADGVILRSASSVPDTDDVNNTDVRKRRSAVTTTTNDDDNTTAIVSVGPIFI
FPGSPGTPQSELFPGAAVLPESDDSLPEGVPTSPLAKQSMIIVTTIVVVATLLLICIVLY
VYVTRARNVHK

Nucleotide sequence

Length: 1,713

>KH2012:KH.C8.611.v1.A.nonSL7-1
ATTATTGTCCTTTGTTACGTGTTAAGTTCTCGAAGCGCTTCGTTTTTGCTGAGTTAAAAT
GTTCGTTCTCGTTTTGTTAAGTTTCCTGCTTTCGAGCTTCAACTCGGCGAATGCTGCTTG
CGTGAACAATTTCCAATGTCCGTTGAACGCTGAATGCAGGCAGGGCACTTGCGTTGCAGT
TGGTGGCGTTACTACTACATTGATCCCACCAGAACAAAACCGAGGGGCATGCACGCCCAA
CCCTTGCCAGAATGATTGCAGATGTGTGCCATCGTGCAAACACGCGTCGGGTTTCTATTG
CACGAGTCCTTCCGGCTTTCTCGGGAAGACTTGCACCATACCCGCCCCGTCGTTATCCTG
CAGTGAAAACACGATCACTATTTCTGTATCTGCGCAGTTAGTTCGCGAATATTCCATGTC
TACAACCGGTAGCTACATTTACATGGGTCAAGGTCCTACTTCTTTACTGCAAGGTGGCAC
CGCAATGTCTAGTGCGTGTGCAGTATCCTCCCCTGTGAACGGCTACTATACGATTTCTAT
TCCGCTCCCGTTCACTGGGTGTGGTACCAGAGTCAGCGGGCCCACCACCGGAACTGTTAA
CACGAATAGCTTCACCAACGAAATCTGGTTGAACACGAACGGTGTTTTATTCGACGTCCC
AATCCCCATCTTTCGATGGACTTGTTCCTACACCGAGAACTACTCCATCGTTACAAGACT
GCAACCAACAGTTGAACCACTACGCATCGTCAAAGGCGACACCGTAATGCGACAAGCGGT
GGCCGAACTTTGCAAAGTTCAATCTGCGTGCCCTGGTGCGTGTCCACCATTGTTCAGTGT
GAAGGAAGGAGCTGCTTACACGGTGTCGGAGATGATTCATCTCACTATATCGTTACAAAC
CCCGACGATGACCGGCCAAGCTTTATACTTGTACAGCCTGACCCTTTCTTGCTCAAGCAC
CCCAGGTTCCTCTGATGCGGTTTCGTTGGTCACCGCGGGTTGTAGCAGCAACATATTGTC
CACTACATTCGGTCGCAACGGTCAAAGCGGGACAGTGTGCGTATCATTCAGAGTTCCCAG
GATGATGGGTTGTAACATGATGTACATTCACGGGTCGATGAAGTCTGCAGTTCCTAGCAC
ACTTTCGGCTTGTCCAGGTGCAGACGGTGTTATCCTGCGCTCGGCTTCCTCGGTACCCGA
TACCGATGACGTCAATAACACTGACGTCAGAAAGCGACGATCAGCTGTTACTACAACCAC
AAACGATGACGACAACACGACTGCTATAGTGAGTGTTGGGCCCATCTTTATATTCCCGGG
TTCGCCAGGTACCCCGCAGTCCGAGCTTTTCCCTGGAGCGGCAGTGTTGCCGGAATCTGA
CGACTCCTTACCGGAAGGTGTCCCGACGTCTCCACTCGCCAAACAGTCGATGATTATCGT
CACGACAATCGTCGTCGTCGCAACTTTATTGTTAATCTGCATTGTGTTGTATGTTTACGT
CACACGAGCTCGTAACGTTCATAAATAAATAATTTATTAATTTCATACTTGTCATTTGTG
GAAGTTGAAAAGGGAAACTCTTAATTGCTTGGGTTAAACATTCAAAAACTTGTGCTTCTG
GAAAATCTTGTAAAATAGTTGGCAATTAAAAGTAGATATGGAAGTCGTTTCGGATAACTG
TCGCTGATACTATAATAAATACATTCTGACGTG

InterProScan

ProSiteProfiles
ZP_dom (IPR001507) - T[102-374] 11.997

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value