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TRANSCRIPT CARD

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  1. Region 'REG00001203' > 
  2. Transcript 'Moocul.CG.ELv1_2.S51...' > 
  3. Transcript 'KH2012:KH.C8.626.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.626.v1.A.nonSL3-1

Possible name(s)

CTCF; CTCFL; ZNF317

Gene model

KH2012:KH.C8.626

Location

KhC8 [2,130,505 / 2,138,880]

Sequences

Amino acid sequence

Length: 1,333

>KH.C8.626.v1.A.nonSL3-1
NLYSFLKLYNIVLCMLPGSFNMDCSGGILGQIFSENGFDNSMESNSDMKQDKFVKGFTHL
QENIFPDVHTLIQSCSDQLCKVESFTVENGQDGLCNQSTPQATASLRMSNGHSYANSPKG
SEEPPGFTEKNIEYLNGDKEDTYIRPNSKKEFLQQLLIKRNGFYFCTECQYSSKYYKPFY
SHCNRSHIPKIQPKFEDAKFLLCCTECPFVTVSTNGFKIHCALKHGKYKAKSVKKLVALD
DPLAITKFLAFISTTKCDIKRKKALEQYNHYFSANMPEEISNNPPKEDTFSPGKDIIQKE
VESADEENESVSDNSPDIRCEKCPFRSKTIPKLLKHYKNNHSRLFPKFVTDRVQQDLLDN
HIEINMPKSAISQQWVNGWMNNECTRLIFHPIYKCRVCDFKGGNSYSIHQHFGQIHPKVG
CSVGNVQVLEDTSIVTSSNTFCLSKGRNLFKCSICADFTCVFMQNMKIHHIENHSDHPLV
ASNTYPEELIKASTLLRCFQCLATFNNMADLLLHVQTQHTELVTNFQMVDSDINSMYVCK
QCNMTVDSLEDLSSHLEIHNNIHAKRFSQHYITCYSCSKCRRVFRGNRYLKHHFSRVHVE
ITDYKFTLNDIPQYMLDHGCQDKLPQDLEVASPSQSVVEEEEDLMSDGYDSTSDPDFKVS
NSNKRFKGMQTVQKTGYYCCWCPHFSINASLLHVHLKRVHKKYFTKSKLEAMKHYATDTD
LTDDDTETENESMDSSEINSAAESDVLPIRVVQTCSHLTWQTKSPEVFKKHVEQKHDEKH
PHKCPHCSKHFICGTVMTMHLRKKHKFLKPGQKQFKPYDNVRTSCTHRNIRTRSPELFKN
HVDHHHSLSAPYHCTMCNSIYVCYNIFSLHIRKKHSIAVTTDLSEYKKEIKYGKNIDTIL
PTKTYSKLAIQAPPVNDKIQLKQDKKYSRKSATSTKHYTHSKSVKTEVGQWKCLFCKRFF
EDYQQVRKHTVSVHPTLQLIRCRWCDFLCKTTVQLNNHNRIHRKFIADRMRELRTIWKEQ
RMNNKISINKKRSALQTTLLEPRAKIRKVDSTVHEKKRIEKTKDSPSSVIIPQPKSPSVS
SRTSSRESTPPSIVQKQKARKSIQGITSSTTETETNAVEVQSKRVTLGECYNVSPQGKLI
CNYCKYETTDTTRVMIHLKANHLQTTSLNCEFCFFESQTFETILDHLQLHHKMARNYHAA
IGISARFPPSNKHTPKISSARLSPAPSLPIARKFYKKTRSIYDKMLSNGRWTSSKPSPGF
LQSGTSEKLPPTAVGSKRTLTKGIKCSYCDTRTYSTYDMEIHLKRHEVSMVDPCKFDEHR
FMLAELDDIIDKF

Nucleotide sequence

Length: 4,470

>KH2012:KH.C8.626.v1.A.nonSL3-1
ACAATCTTTATTCGTTTCTAAAGCTATACAATATAGTGTTATGTATGTTGCCTGGATCTT
TTAACATGGACTGCAGTGGTGGAATTTTGGGACAAATATTCTCAGAAAATGGCTTTGATA
ACTCAATGGAAAGTAACAGTGACATGAAACAGGACAAGTTTGTCAAAGGGTTTACACACC
TTCAGGAAAACATATTTCCTGATGTGCACACTTTGATTCAAAGTTGTTCAGATCAACTTT
GTAAAGTTGAGTCTTTCACAGTAGAGAATGGTCAGGATGGTCTTTGTAATCAATCTACAC
CACAAGCTACTGCTTCTTTAAGAATGTCAAATGGGCACAGTTATGCCAACTCTCCAAAGG
GATCTGAGGAGCCACCAGGGTTTACTGAGAAAAACATTGAATATTTGAATGGTGATAAAG
AAGATACTTACATACGACCCAATTCGAAAAAGGAGTTTTTGCAGCAGTTGCTCATTAAAA
GAAATGGTTTTTATTTCTGCACAGAGTGTCAATACAGTAGCAAATACTACAAACCATTTT
ACAGTCATTGTAATAGAAGTCATATACCCAAAATACAACCTAAATTTGAGGATGCCAAGT
TTTTGTTATGTTGTACTGAATGCCCCTTTGTGACTGTTAGCACAAATGGTTTTAAAATTC
ACTGTGCATTGAAACATGGAAAATATAAAGCTAAATCTGTGAAAAAATTAGTGGCACTCG
ATGATCCGTTGGCTATCACTAAATTTTTGGCTTTCATTTCCACTACCAAATGTGATATAA
AACGCAAAAAAGCTTTGGAACAATACAACCACTATTTCTCAGCTAATATGCCAGAGGAAA
TATCAAACAATCCCCCTAAAGAAGATACATTTTCACCTGGAAAAGATATTATTCAGAAAG
AGGTGGAATCTGCAGATGAGGAAAATGAGAGTGTATCTGACAACAGCCCAGATATCAGGT
GTGAGAAATGTCCTTTTCGTTCAAAAACCATTCCAAAACTTTTGAAACATTACAAGAACA
ACCACAGTAGGTTGTTTCCAAAATTTGTTACTGATAGGGTTCAGCAAGATCTGTTGGATA
ATCATATTGAAATAAACATGCCCAAGTCAGCTATTTCACAACAGTGGGTAAATGGATGGA
TGAATAATGAATGCACCCGGCTTATTTTTCATCCTATTTACAAATGCAGAGTTTGTGATT
TTAAAGGTGGAAACTCATACTCGATACATCAACACTTTGGGCAAATTCACCCCAAAGTTG
GATGCTCTGTTGGTAACGTACAAGTACTTGAAGACACCAGCATCGTGACTTCTTCAAACA
CATTTTGCCTCAGCAAAGGCAGGAACTTGTTCAAGTGTTCAATATGTGCAGACTTCACTT
GTGTTTTCATGCAAAACATGAAAATTCATCACATAGAAAATCACTCTGACCACCCATTAG
TTGCAAGCAATACGTACCCAGAAGAACTTATCAAAGCGTCCACTCTACTTCGCTGTTTTC
AATGTTTAGCAACCTTTAATAACATGGCAGATTTATTGTTACATGTTCAAACACAACACA
CTGAGTTGGTAACAAACTTCCAAATGGTAGACAGTGATATCAACTCTATGTATGTCTGTA
AACAATGTAACATGACTGTAGACTCTTTGGAGGATCTTTCCTCTCACTTAGAAATACACA
ACAACATTCACGCTAAAAGATTTTCCCAGCATTACATTACTTGTTATTCGTGTTCAAAGT
GCAGAAGAGTCTTTCGTGGCAATAGATACTTAAAACACCACTTCAGTCGTGTTCATGTTG
AAATAACTGACTATAAGTTTACTTTGAATGACATTCCACAGTACATGCTAGACCATGGGT
GCCAAGATAAACTGCCACAGGATTTAGAAGTTGCCTCTCCATCCCAGAGTGTTGTAGAAG
AAGAAGAAGATCTTATGTCTGATGGTTATGATTCTACAAGTGATCCAGACTTTAAGGTGT
CTAATAGTAATAAGCGATTCAAGGGAATGCAGACAGTGCAAAAAACTGGCTATTATTGTT
GCTGGTGTCCACATTTTAGTATTAACGCTTCTCTTTTACACGTTCACCTAAAACGGGTTC
ATAAAAAATATTTTACAAAGTCAAAACTTGAAGCAATGAAGCATTATGCAACTGACACTG
ATTTAACAGATGATGATACAGAAACTGAGAATGAGAGTATGGATTCATCAGAAATTAATT
CAGCCGCAGAATCTGATGTGTTACCTATTAGAGTTGTTCAAACATGCTCTCATCTCACTT
GGCAAACAAAAAGCCCAGAAGTATTCAAAAAGCATGTGGAACAAAAACATGATGAGAAGC
ATCCCCACAAATGTCCCCATTGCTCAAAGCACTTTATCTGCGGCACAGTAATGACAATGC
ACCTGCGTAAAAAGCACAAGTTTTTAAAACCTGGCCAAAAGCAGTTCAAACCATATGATA
ATGTGCGCACGAGCTGCACTCATCGTAACATTCGCACAAGAAGTCCAGAACTTTTTAAAA
ATCATGTTGATCACCACCACAGCTTGTCAGCCCCTTACCACTGCACAATGTGCAACAGTA
TATACGTGTGCTACAACATATTTTCACTGCATATTCGTAAAAAGCATTCCATTGCTGTAA
CAACTGATTTAAGTGAGTACAAAAAAGAAATCAAATATGGGAAAAATATAGATACCATAT
TACCTACAAAAACTTACTCCAAACTCGCAATACAAGCCCCACCTGTCAACGATAAGATTC
AATTAAAACAAGATAAGAAATATTCAAGAAAAAGTGCAACCTCAACAAAGCATTACACTC
ATTCAAAGAGTGTGAAAACAGAAGTTGGACAATGGAAATGTTTATTCTGCAAAAGGTTTT
TCGAAGATTATCAGCAAGTTAGGAAGCACACAGTTAGCGTGCATCCAACATTGCAGTTGA
TCAGATGCAGATGGTGTGATTTCTTGTGCAAAACAACAGTGCAGCTCAACAATCATAACA
GGATCCACAGGAAGTTCATTGCCGACCGTATGAGAGAATTAAGAACCATATGGAAAGAAC
AACGAATGAATAACAAAATCAGCATCAACAAGAAAAGATCTGCTTTACAAACCACATTGT
TGGAGCCCAGGGCAAAAATTAGAAAGGTTGACTCAACTGTACATGAAAAGAAAAGAATTG
AAAAAACAAAAGATTCTCCAAGTTCTGTCATTATTCCACAGCCGAAATCACCATCTGTTT
CATCACGCACAAGTTCCCGGGAGTCAACACCCCCTTCTATTGTACAGAAACAAAAAGCTA
GAAAAAGTATTCAAGGAATAACATCAAGCACAACTGAAACCGAGACCAATGCTGTAGAAG
TTCAAAGCAAAAGAGTGACTTTAGGTGAATGCTACAATGTTTCACCCCAAGGGAAGCTTA
TTTGCAACTACTGCAAATATGAAACGACGGACACCACTCGAGTTATGATTCATTTAAAAG
CTAACCATCTTCAAACAACTTCGTTGAATTGCGAGTTTTGCTTTTTTGAGTCGCAAACTT
TCGAAACGATTCTTGATCACCTTCAATTGCATCACAAGATGGCAAGAAACTATCATGCTG
CGATCGGAATCTCTGCACGTTTCCCACCGAGCAATAAACACACGCCAAAGATCTCAAGCG
CAAGATTGTCTCCCGCACCGTCTTTGCCAATTGCAAGGAAGTTCTACAAGAAAACAAGAT
CCATCTATGATAAGATGTTGTCGAATGGTAGATGGACTTCATCCAAGCCCAGTCCTGGAT
TTCTTCAGTCTGGAACTTCTGAGAAATTACCTCCAACCGCCGTTGGAAGTAAGCGTACAT
TGACGAAAGGAATCAAGTGCTCTTACTGTGACACTAGAACTTACTCCACGTATGATATGG
AAATTCATTTGAAGAGACATGAAGTGTCCATGGTGGATCCGTGTAAATTCGACGAGCATA
GATTTATGTTAGCCGAATTAGACGACATAATTGACAAGTTTTAACCGAGAAAAACAATTG
CCAAAATTATTTTTGTTAGAACTGCTGCTGAACTAAAATATTGCAGTTTTTCATGTATTG
TTTTATATCATGTTAGATCTCGTTTAAAGTTTTACTTGAACCTGACCTCGCGACTGTTAC
CATTGTACAGTAAATTGCGTTTCAATTTGCCTTTATAACGGCATAGTTTTTACACCAATG
TTTTTACAACTCGTATACCCCCGCACTAAATACTCTCACAGCCTGACTTGTAAATAATTA
TCGCCTTTTGCCCGAGCTAAATCTAAATGATGTTTGCTTACGATTTTGTACAGTTTCGTA
TTTTTATTACGTTTTTAATGTTTTAGTAATTATGCATGGAATAATCATTTTTATGAACAT
ATACTAAACTAAAACTAGTGCGCCTAATTTTACTGGGTTGGAAAGAATATCGTTATAAAA
AAATGGAACCGTAAATGCGAACGTTCTTAC

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[164-187] 13.0 - T[202-225] 6.2 - T[318-341] 0.12 - T[393-416] 4.8 - T[450-474] 32.0 - T[496-519] 0.19 - T[537-559] 0.089 - T[575-598] 0.33 - T[677-700] 12.0 - T[753-776] 180.0 - T[782-805] 6.1 - T[852-875] 12.0 - T[951-974] 1.0 - T[980-1002] 0.1 - T[1139-1162] 2.2 - T[1168-1190] 11.0 - T[1284-1306] 0.18
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[498-519] . - T[539-559] . - T[577-598] . - T[784-805] . - T[854-875] . - T[953-974] . - T[982-1002] .
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[537-564] 8.85 - T[575-598] 9.66 - T[782-810] 10.346

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value