- Transcript 'KH2012:KH.C8.649.v1....' >
- Transcript 'KH2012:KH.C8.649.v1....' >
- Transcript 'KH2012:KH.C8.649.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.649.v1.A.nonSL3-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC8 [1,926,529 / 1,929,411]
Amino acid sequence
Length: 382
>KH.C8.649.v1.A.nonSL3-1
KQKKMSEEEEEQTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
VGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPH
AIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASS
SGLEKSYELPDGQVITIGNERFRCPETMFQPSFIGMESSGVHETTYNSIMKCDIDIRKDL
YANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
QMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,560
>KH2012:KH.C8.649.v1.A.nonSL3-1
AGTCAGCAACGACATTGCAAGTGATACCTTCTCAACCAAGCAACAGATAAAAACAAAAGA
AAATGTCTGAAGAAGAAGAAGAACAAACCGCGCTCGTATGCGACAACGGCTCCGGACTTG
TAAAAGCCGGTTTCGCTGGAGATGACGCACCACGTGCCGTCTTCCCATCCATCGTCGGTC
GCCCTAGACATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACAGCTATGTCGGTGACG
AAGCCCAAAGCAAGAGAGGTATCCTGACTCTCAAATACCCGATCGAGCACGGTATCATCA
CCAACTGGGACGACATGGAGAAGATCTGGCATCACACCTTCTACAACGAGCTCCGTGTTG
CTCCAGAAGAGCACCCCGTCTTGCTGACTGAAGCCCCACTTAACCCCAAGGCCAACCGTG
AAAAGATGACCCAGATCATGTTCGAGACATTCAATGTCCCAGCCATGTACGTCGCCATCC
AGGCTGTGCTTTCCCTGTACGCCTCTGGCCGTACCACCGGTATCGTTCTCGACTCTGGTG
ACGGTGTCTCTCACAATGTCCCAATCTACGAGGGTTACGCACTCCCTCACGCCATCATGC
GATTGGATTTGGCTGGCCGTGACCTTACCGACTACCTGATGAAGATCCTTACTGAGAGAG
GCTACTCTTTCGTCACTACCGCTGAGCGTGAAATCGTGCGTGACATCAAGGAGAAGCTTT
GCTACGTTGCCCTCGACTTCGAACAAGAGATGGCCACCGCAGCATCCAGCAGTGGACTCG
AAAAGAGCTACGAACTTCCTGACGGTCAAGTCATCACCATCGGAAACGAGCGATTCAGAT
GCCCAGAGACTATGTTCCAACCATCCTTCATTGGTATGGAATCCTCCGGTGTCCATGAGA
CCACCTACAACTCCATCATGAAGTGCGACATTGACATCCGTAAAGATCTTTACGCCAACA
ACGTTCTCTCCGGAGGTACAACCATGTACCCTGGTATCGCTGACAGAATGCAGAAGGAGA
TCACTGCTCTTGCTCCCAGCACCATGAAGATCAAGATCATTGCTCCACCAGAGAGGAAAT
ACTCCGTATGGATCGGAGGATCCATTCTTGCTTCACTCTCCACCTTCCAACAGATGTGGA
TCACCAAGCAAGAATACGACGAGGCTGGCCCATCCATTGTCCACAGAAAATGCTTCTAAT
TCTTCTCGCATAAGAACTTGTATAGTGTCAATAAAGATTTACGGTTCGCGTTAGTCAACT
TGTGGTTTCCCGAGAGCACGTAGCTAACAAATACACTACAGTCCTCCTTAATTGTCGTAT
TCAAATGTTATCGTGTAAAATAAAGTCATGCAATGTATAGCAGTATATAGCTTTCTGCCG
CTGTCTTGAAATACGGCAAAAATAACGTTTTTGGACCGATTTGTAATATTAAGCATGGAA
GTCCTACAAAGCTTTACTTGTCTGAACTGCCGAGTGATTTTTATAACACGCGTGCCGATG
CCAAATGTTCGTAGGCTATAACACAAACTATTCTGAAGCATTGAAAACAGCTGAATGAGA
| PANTHER |
Actin (IPR004000) - T[8-381] 3.3E-267 |
| Pfam |
Actin (IPR004000) - T[10-382] 5.4E-149 |
| SMART |
Actin (IPR004000) - T[12-382] 2.4E-237 |
| PRINTS |
Actin (IPR004000) - T[33-42] 7.0E-58 - T[56-67] 7.0E-58 - T[68-90] 7.0E-58 - T[122-135] 7.0E-58 - T[147-166] 7.0E-58 - T[243-259] 7.0E-58 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[60-70] . - T[363-371] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[111-123] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.8 % | 768 | 0 |
| ACTS_HUMAN | 97.067 % | 769 | 0 |
| ACTC_HUMAN | 97.067 % | 769 | 0 |