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  1. Clone 'cilv040i21' > 
  2. Transcript 'KH2012:KH.L170.28.v2...' > 
  3. Transcript 'Cisavi.CG.ENS81.R27....' > 
  4. Transcript 'KH2012:KH.C8.87.v3.A...' > 
  5. Transcript 'KH2012:KH.C8.663.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.663.v1.A.nonSL4-1

Possible name(s)

NDC1

Gene model

KH2012:KH.C8.663

Location

KhC8 [3,516,287 / 3,530,907]

Sequences

Amino acid sequence

Length: 678

>KH.C8.663.v1.A.nonSL4-1
ACCLVGLQFQQCLHIHISFKCVLRFYRFYEDNMAKNWLISQEFIWRNAAAAVWTWVVNSS
WLLVALFVWTFTPSNHIYAVYDYFLLLFSFRVWVLIFCISCLSSLFVKLHMQGSKVTCKL
PTTRFQSLVAMFSFKRIFLTMCHGVLCGVITAFLAGITESKFSTVYIQCKNTPDYVCLNE
SCYILILFGSVVGAANFVSRSNKHLYCLNFPIVQQARFISIKCNFHQMLVQSYKTCAKFL
QYFLIFYYLIGYLTREFVADLFRAGPCDGHIVSTLNIMGVISLAWTLWVSGTILLLLHDV
SWHLFNIYATKMFPFRMDSVFPEDKPKILTSNLTSDQPLLVQHLAFQYLSSIASSSSIKR
KQIYIISHDTGSANQPKWNLILDECLARLKKLTTSIKDHKQIALRMEQNKVKTTKSSKSS
SSSQSSSGQSPAPDSSQFMSVSAFNHRPKSCDTLDGVNMSCFDVSSLNTTNAGNPLNSPN
LNGSMLTVPTPKLWTKQIRKRAALHSNVSSPVPIIQPYQEVPQVPYKTLNSQIQALLQRG
ASAIKKFPVVSFLFNEIPSHSMANLYSEHNIYRWSIRSLSSLSAYSLNEDDYGVVQRRLH
EVINCLLDLVVTLDKHGKVLPICTSETTNLMLRQQQSIKNEAKSAVYRITDTFSTQLESI
PVDAEFRRKLRSFVEHQE

Nucleotide sequence

Length: 3,024

>KH2012:KH.C8.663.v1.A.nonSL4-1
AATTGTGAACTTTTAAGGGGCTAAGCTTGTTGCCTTGTTGGATTACAATTCCAACAGTGT
CTACATATTCATATTTCTTTTAAATGTGTACTGCGGTTTTACCGATTCTACGAAGATAAT
ATGGCTAAGAACTGGTTGATTTCCCAGGAGTTTATTTGGAGAAATGCTGCAGCAGCTGTT
TGGACTTGGGTAGTTAATTCATCTTGGCTTTTGGTTGCTTTATTTGTATGGACATTTACA
CCTTCAAATCATATTTATGCTGTGTATGATTATTTTCTTCTCCTTTTTTCATTCCGTGTT
TGGGTTTTGATCTTTTGCATATCATGTCTTAGTTCATTGTTTGTCAAGCTACACATGCAA
GGCTCCAAAGTGACATGCAAATTGCCAACGACTCGTTTTCAATCTCTGGTTGCCATGTTT
AGTTTCAAACGGATATTCCTAACCATGTGTCATGGGGTTCTATGTGGGGTTATCACAGCT
TTCCTAGCGGGTATTACGGAAAGCAAATTTTCCACTGTTTATATTCAGTGCAAGAACACG
CCTGATTATGTGTGTCTAAATGAATCATGTTACATATTGATACTATTTGGTTCTGTGGTT
GGTGCAGCCAATTTTGTTTCAAGATCTAACAAGCATCTGTATTGTCTTAACTTCCCAATA
GTGCAGCAAGCCCGTTTTATTTCCATAAAATGCAACTTCCATCAAATGTTGGTACAAAGT
TACAAAACGTGTGCGAAGTTCTTACAGTATTTTCTAATCTTCTATTACTTGATTGGATAT
TTAACAAGAGAATTTGTTGCTGATCTCTTCAGAGCTGGACCATGTGATGGCCATATTGTA
AGTACCTTGAACATTATGGGGGTTATATCACTTGCATGGACACTGTGGGTATCTGGTACA
ATATTGCTGCTTCTTCATGATGTATCTTGGCATCTATTCAATATTTATGCAACTAAGATG
TTTCCATTTCGAATGGATTCTGTCTTCCCAGAAGACAAACCAAAGATACTGACATCAAAT
CTCACCTCGGACCAACCACTTCTTGTTCAGCACTTAGCGTTCCAGTACTTGAGTAGCATT
GCAAGTTCTTCAAGCATTAAAAGGAAACAAATCTACATTATCTCCCATGACACCGGTAGT
GCTAACCAACCAAAATGGAACCTTATTTTGGACGAATGCCTTGCACGACTGAAGAAATTA
ACCACAAGTATAAAAGACCACAAACAAATTGCTTTGAGAATGGAACAAAATAAAGTGAAA
ACGACAAAATCTTCTAAATCTTCATCATCCTCTCAATCCTCGTCCGGTCAATCACCTGCA
CCAGATTCGTCTCAGTTTATGTCCGTTTCTGCATTCAACCATCGACCTAAGTCATGTGAC
ACGTTAGACGGAGTGAACATGTCTTGCTTTGACGTATCTTCACTGAATACTACAAACGCT
GGCAACCCACTTAACTCACCCAATTTAAACGGGTCAATGCTGACTGTTCCAACACCAAAG
CTATGGACAAAACAAATACGAAAGAGAGCTGCATTGCATTCAAATGTTTCTAGTCCAGTG
CCAATCATCCAACCTTATCAGGAGGTCCCACAAGTGCCATACAAAACACTGAACAGTCAA
ATCCAAGCATTATTACAACGTGGAGCTTCCGCCATTAAAAAGTTTCCAGTGGTATCTTTT
TTGTTCAATGAGATTCCCAGCCACAGCATGGCAAACTTATATTCGGAGCACAATATTTAT
CGTTGGTCAATTCGTAGTCTGTCTTCATTATCTGCATACTCACTTAATGAAGATGACTAC
GGTGTCGTGCAACGTCGTTTACATGAAGTTATTAACTGCTTGTTGGATTTAGTCGTTACG
CTTGATAAACACGGAAAAGTCCTTCCTATTTGTACTTCAGAGACAACAAACCTTATGTTG
CGCCAACAGCAAAGCATCAAAAACGAAGCGAAAAGTGCAGTGTACAGAATAACGGACACT
TTCTCTACACAGCTCGAGTCAATTCCAGTAGACGCGGAATTTCGACGTAAACTACGATCT
TTTGTCGAGCATCAGGAATAAAGTAGACTCTATGTTGCAGCGAATGGCTAGCACAAATAA
ACAAGGCCAGACTGAGTTCATCGTGACGTTAATAAAAGTTCTTCTAAAAATCGAAAAAAT
GCGGCCTTTCTGTACCATTTCTTGTATGATGTTTTCTTGTGTTTGGTGCGTATGTGGTAA
GGTGGCTATTACTTTTCCTCTGCGACAGTGAGGCTCATTCTAGCATTCTTCTTTGTTTAG
TCATCACTGGTCAAGCAGACGTGAAAAACACGTTCTCCCGGCAATGAATTATCACCCGAC
CGATCGACACGTACACTGAGGCCCAAAATAACTCGCAAAATGTCAACCGACCAAAATATC
GTGCTTAACCAGTGGGTCACGTCATTTCCACTTCATGTGTAACGGCCGGGACTTGGTGAA
AGCCCTGCTCTTTAAACAGACTTATTAATCATACAGAATGGCCTAAAAGCCGCTACTAAC
TTGTAAGTTCACGATTTCTGTCGTAAAATAAGAGAACTGTAATCACGTTACACCTAAGAC
CCCCTAGTTTCGAATATATTCGCTATTTTTTTTCTTTAAGCAGATGCGGTATTGGAATAG
GAGTTATTTTTGCCACTTTAAAGCTAAAACATGAAAGTTTCGGGTAATTGCCGCTAATTT
GTTACCTTCCTATTGTAGCCATGTTTGTATGACAACGATCCTCGTGTTTGTTTGTTCCTT
TGTTCGCCCAGCGAAACATGCCTCCTGTCACCGAACACCAGCCTTTCATTCTCCTTTTGT
TTTTACGTTTGCCTCGTTGACGACAATCCATATGGCGATCAGTTTGCACAACCTTCAATC
CGTAAACGTAAGAGGTGTGGACTGTGTTTCGTGTCTGTCACATTTAAAATCATACAGGAG
GAAAGCGTTTAACGAGGCTTTGTTCATTCGAACGTGTCAATATTATTTCAACTTTACGAA
AGCGTCGGTAGAGTCTTTCAACAC

InterProScan

PANTHER
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[34-678] 6.5E-142
Pfam
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[45-671] 2.1E-84

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NDC1_HUMAN 25 % 160 1.15E-41