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  1. Transcript 'KH2012:KH.C4.420.v1....' > 
  2. Clone 'cien123168' > 
  3. Transcript 'KH2012:KH.C7.640.v1....' > 
  4. Transcript 'KH2012:KH.C10.517.v1...' > 
  5. Transcript 'KH2012:KH.C8.663.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.663.v1.A.SL3-1

Possible name(s)

NDC1

Gene model

KH2012:KH.C8.663

Location

KhC8 [3,516,287 / 3,530,890]

Sequences

Amino acid sequence

Length: 678

>KH.C8.663.v1.A.SL3-1
ACCLVGLQFQQCLHIHISFKCVLRFYRFYEDNMAKNWLISQEFIWRNAAAAVWTWVVNSS
WLLVALFVWTFTPSNHIYAVYDYFLLLFSFRVWVLIFCISCLSSLFVKLHMQGSKVTCKL
PTTRFQSLVAMFSFKRIFLTMCHGVLCGVITAFLAGITESKFSTVYIQCKNTPDYVCLNE
SCYILILFGSVVGAANFVSRSNKHLYCLNFPIVQQARFISIKCNFHQMLVQSYKTCAKFL
QYFLIFYYLIGYLTREFVADLFRAGPCDGHIVSTLNIMGVISLAWTLWVSGTILLLLHDV
SWHLFNIYATKMFPFRMDSVFPEDKPKILTSNLTSDQPLLVQHLAFQYLSSIASSSSIKR
KQIYIISHDTGSANQPKWNLILDECLARLKKLTTSIKDHKQIALRMEQNKVKTTKSSKSS
SSSQSSSGQSPAPDSSQFMSVSAFNHRPKSCDTLDGVNMSCFDVSSLNTTNAGNPLNSPN
LNGSMLTVPTPKLWTKQIRKRAALHSNVSSPVPIIQPYQEVPQVPYKTLNSQIQALLQRG
ASAIKKFPVVSFLFNEIPSHSMANLYSEHNIYRWSIRSLSSLSAYSLNEDDYGVVQRRLH
EVINCLLDLVVTLDKHGKVLPICTSETTNLMLRQQQSIKNEAKSAVYRITDTFSTQLESI
PVDAEFRRKLRSFVEHQE

Nucleotide sequence

Length: 3,007

>KH2012:KH.C8.663.v1.A.SL3-1
GGGCTAAGCTTGTTGCCTTGTTGGATTACAATTCCAACAGTGTCTACATATTCATATTTC
TTTTAAATGTGTACTGCGGTTTTACCGATTCTACGAAGATAATATGGCTAAGAACTGGTT
GATTTCCCAGGAGTTTATTTGGAGAAATGCTGCAGCAGCTGTTTGGACTTGGGTAGTTAA
TTCATCTTGGCTTTTGGTTGCTTTATTTGTATGGACATTTACACCTTCAAATCATATTTA
TGCTGTGTATGATTATTTTCTTCTCCTTTTTTCATTCCGTGTTTGGGTTTTGATCTTTTG
CATATCATGTCTTAGTTCATTGTTTGTCAAGCTACACATGCAAGGCTCCAAAGTGACATG
CAAATTGCCAACGACTCGTTTTCAATCTCTGGTTGCCATGTTTAGTTTCAAACGGATATT
CCTAACCATGTGTCATGGGGTTCTATGTGGGGTTATCACAGCTTTCCTAGCGGGTATTAC
GGAAAGCAAATTTTCCACTGTTTATATTCAGTGCAAGAACACGCCTGATTATGTGTGTCT
AAATGAATCATGTTACATATTGATACTATTTGGTTCTGTGGTTGGTGCAGCCAATTTTGT
TTCAAGATCTAACAAGCATCTGTATTGTCTTAACTTCCCAATAGTGCAGCAAGCCCGTTT
TATTTCCATAAAATGCAACTTCCATCAAATGTTGGTACAAAGTTACAAAACGTGTGCGAA
GTTCTTACAGTATTTTCTAATCTTCTATTACTTGATTGGATATTTAACAAGAGAATTTGT
TGCTGATCTCTTCAGAGCTGGACCATGTGATGGCCATATTGTAAGTACCTTGAACATTAT
GGGGGTTATATCACTTGCATGGACACTGTGGGTATCTGGTACAATATTGCTGCTTCTTCA
TGATGTATCTTGGCATCTATTCAATATTTATGCAACTAAGATGTTTCCATTTCGAATGGA
TTCTGTCTTCCCAGAAGACAAACCAAAGATACTGACATCAAATCTCACCTCGGACCAACC
ACTTCTTGTTCAGCACTTAGCGTTCCAGTACTTGAGTAGCATTGCAAGTTCTTCAAGCAT
TAAAAGGAAACAAATCTACATTATCTCCCATGACACCGGTAGTGCTAACCAACCAAAATG
GAACCTTATTTTGGACGAATGCCTTGCACGACTGAAGAAATTAACCACAAGTATAAAAGA
CCACAAACAAATTGCTTTGAGAATGGAACAAAATAAAGTGAAAACGACAAAATCTTCTAA
ATCTTCATCATCCTCTCAATCCTCGTCCGGTCAATCACCTGCACCAGATTCGTCTCAGTT
TATGTCCGTTTCTGCATTCAACCATCGACCTAAGTCATGTGACACGTTAGACGGAGTGAA
CATGTCTTGCTTTGACGTATCTTCACTGAATACTACAAACGCTGGCAACCCACTTAACTC
ACCCAATTTAAACGGGTCAATGCTGACTGTTCCAACACCAAAGCTATGGACAAAACAAAT
ACGAAAGAGAGCTGCATTGCATTCAAATGTTTCTAGTCCAGTGCCAATCATCCAACCTTA
TCAGGAGGTCCCACAAGTGCCATACAAAACACTGAACAGTCAAATCCAAGCATTATTACA
ACGTGGAGCTTCCGCCATTAAAAAGTTTCCAGTGGTATCTTTTTTGTTCAATGAGATTCC
CAGCCACAGCATGGCAAACTTATATTCGGAGCACAATATTTATCGTTGGTCAATTCGTAG
TCTGTCTTCATTATCTGCATACTCACTTAATGAAGATGACTACGGTGTCGTGCAACGTCG
TTTACATGAAGTTATTAACTGCTTGTTGGATTTAGTCGTTACGCTTGATAAACACGGAAA
AGTCCTTCCTATTTGTACTTCAGAGACAACAAACCTTATGTTGCGCCAACAGCAAAGCAT
CAAAAACGAAGCGAAAAGTGCAGTGTACAGAATAACGGACACTTTCTCTACACAGCTCGA
GTCAATTCCAGTAGACGCGGAATTTCGACGTAAACTACGATCTTTTGTCGAGCATCAGGA
ATAAAGTAGACTCTATGTTGCAGCGAATGGCTAGCACAAATAAACAAGGCCAGACTGAGT
TCATCGTGACGTTAATAAAAGTTCTTCTAAAAATCGAAAAAATGCGGCCTTTCTGTACCA
TTTCTTGTATGATGTTTTCTTGTGTTTGGTGCGTATGTGGTAAGGTGGCTATTACTTTTC
CTCTGCGACAGTGAGGCTCATTCTAGCATTCTTCTTTGTTTAGTCATCACTGGTCAAGCA
GACGTGAAAAACACGTTCTCCCGGCAATGAATTATCACCCGACCGATCGACACGTACACT
GAGGCCCAAAATAACTCGCAAAATGTCAACCGACCAAAATATCGTGCTTAACCAGTGGGT
CACGTCATTTCCACTTCATGTGTAACGGCCGGGACTTGGTGAAAGCCCTGCTCTTTAAAC
AGACTTATTAATCATACAGAATGGCCTAAAAGCCGCTACTAACTTGTAAGTTCACGATTT
CTGTCGTAAAATAAGAGAACTGTAATCACGTTACACCTAAGACCCCCTAGTTTCGAATAT
ATTCGCTATTTTTTTTCTTTAAGCAGATGCGGTATTGGAATAGGAGTTATTTTTGCCACT
TTAAAGCTAAAACATGAAAGTTTCGGGTAATTGCCGCTAATTTGTTACCTTCCTATTGTA
GCCATGTTTGTATGACAACGATCCTCGTGTTTGTTTGTTCCTTTGTTCGCCCAGCGAAAC
ATGCCTCCTGTCACCGAACACCAGCCTTTCATTCTCCTTTTGTTTTTACGTTTGCCTCGT
TGACGACAATCCATATGGCGATCAGTTTGCACAACCTTCAATCCGTAAACGTAAGAGGTG
TGGACTGTGTTTCGTGTCTGTCACATTTAAAATCATACAGGAGGAAAGCGTTTAACGAGG
CTTTGTTCATTCGAACGTGTCAATATTATTTCAACTTTACGAAAGCGTCGGTAGAGTCTT
TCAACAC

InterProScan

PANTHER
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[34-678] 6.5E-142
Pfam
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[45-671] 2.1E-84

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NDC1_HUMAN 25 % 160 1.15E-41