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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...'
  2. Clone 'cien77491'
  3. Clone 'cign064d12'
  4. Transcript 'KH2012:KH.C8.734.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.734.v1.A.nonSL2-1

Possible name(s)

SNX2; SNX30; SNX7

Location

KhC8 [2,963,999 / 2,970,494]

Sequences

Amino acid sequence

Length: 452

>KH.C8.734.v1.A.nonSL2-1
IINIMSSEKEEVVENTNLLDSDPLTQVDDEKSDLFDDDEGLVKSTTTEEATDPGSMTNEL
DSRDLFITVSNPEKHITTMETYITYKITTKTTRSIFDNSEYSVQRRYQDFVWLRNKLEEK
HETHLIPPLPSKFIMKGMLDRFNRQFTQTRCRALHNFLDRISRHSVISFDENLQVFLTAK
EFTAFRKQSESFMSRVGGSVKSISTAAVRLKDRDPEFDEVLNQVTQFGEKIGVLERVAER
LHAEKKEFVAELKEFSPTFSMWSASEDDVIAPIMTSTSSAVEACAEAAEANLKIHEFEYM
PPLREYVLYCDVVKQVLRRRDNFQLQHDKVVAELQRKQDEKENLPKSDQSYSVGALMGKS
ANEVKDQKELKLEQQIEEISKRRDDLNDKLECANANLRSDVDRWKVDKLHDMAQIFDDLA
DSQIQFHQQCLSAWEHILPAMQEKDQSTDYET

Nucleotide sequence

Length: 2,290

>KH2012:KH.C8.734.v1.A.nonSL2-1
ATTATAAATATCATGAGTTCTGAAAAAGAAGAAGTCGTTGAAAATACGAATTTGTTGGAT
TCGGATCCACTTACTCAAGTTGACGACGAAAAATCAGATTTGTTTGACGATGACGAGGGA
CTTGTTAAATCAACAACCACAGAAGAAGCAACGGATCCAGGTTCGATGACAAATGAACTT
GATTCAAGAGATCTTTTCATTACTGTCTCTAATCCAGAGAAACACATAACAACCATGGAA
ACCTATATTACTTATAAGATAACTACAAAGACCACCAGAAGTATATTTGACAACAGTGAA
TATTCAGTTCAGAGACGATATCAAGATTTTGTTTGGCTTCGTAATAAATTAGAAGAAAAG
CACGAAACCCATCTTATTCCACCTCTGCCATCTAAGTTTATAATGAAGGGAATGTTAGAT
CGTTTCAACCGTCAATTCACTCAAACTCGATGCAGGGCACTTCATAATTTCCTCGACCGA
ATATCCCGACATTCCGTCATTTCATTCGATGAAAATCTTCAAGTCTTCTTAACAGCTAAG
GAATTTACTGCGTTCCGGAAACAAAGTGAAAGTTTCATGTCTCGTGTCGGGGGGTCGGTG
AAATCTATTTCAACCGCTGCTGTGAGACTAAAAGATAGAGATCCTGAATTCGACGAGGTT
CTCAACCAAGTTACACAGTTTGGGGAGAAGATTGGAGTTTTGGAACGAGTTGCTGAGAGG
CTGCATGCGGAGAAAAAAGAATTTGTTGCCGAATTGAAAGAATTTTCGCCGACGTTTTCA
ATGTGGTCTGCTTCTGAGGATGATGTCATAGCACCCATTATGACATCAACAAGCAGTGCT
GTGGAAGCTTGTGCTGAAGCTGCTGAGGCTAATTTAAAGATTCATGAGTTTGAATACATG
CCTCCCTTGAGGGAGTATGTGTTATACTGCGACGTGGTGAAGCAAGTTTTAAGAAGACGA
GATAATTTTCAACTACAGCACGATAAAGTAGTGGCTGAACTACAAAGAAAACAAGATGAA
AAAGAAAATCTTCCAAAATCTGACCAATCATATTCTGTCGGGGCATTGATGGGAAAATCA
GCCAATGAGGTGAAAGATCAAAAAGAATTAAAACTCGAACAACAAATTGAGGAGATATCG
AAAAGAAGAGATGATTTAAACGACAAACTCGAATGTGCGAATGCAAATTTAAGATCAGAC
GTAGATCGTTGGAAAGTTGATAAACTGCATGACATGGCACAAATATTTGATGACTTGGCA
GATTCACAAATCCAATTTCATCAGCAGTGTCTATCTGCATGGGAACACATTCTACCTGCC
ATGCAAGAAAAAGATCAATCTACAGATTATGAGACTTAACTTCAAGTAGCAAATAGTTTT
CATATATTAAGTGATCTGTTCCATTGATGTTAGCTAGTATATTCTATATTGCTCAATTTT
CTAAATAGATTTGATTGAAAAGTTTCATAAAGATTTTTAGGTATAAAAAAGATTTGATAA
TTGGTGTCAATTTTTCAATGCTAAATTATCTTTCTAATGTAGTAACCAGTGGTTCTCAAC
CTAATTGCATCATTAACCTCTTAAACAGAATTGTATAAATTCTTGTGACTTGTCTTACAA
TTTAATTGAAGTGACTCAATTTACTTGTCCAAGTTTTATTGTGTGTTTACTGAAGTTAGG
TGTAGTTTCAAAAATCCGGTCGCAAAAGTTTTTCTGTTACTTTGTGTTTAGCGTTTGGGT
TATTTTTTGGGTGAGATTGTACAGCGAGGCACTAATTACACTAGCCTAATATTTGGGTCA
CTGCAAAAGGTTGAGAAGCACTGGTTTCAAATTTGGAGTATTAAATAAATGTCTTCACCA
AACTATATAGTACTGTGGAGTAAGATGGGATATCATAAGCATCTAAATCCCATACTGTTG
AATCGTGTTTTAAACAATTACCAACACTATATTAGGGGCACGAGGGTAGAGGTATTAAAA
TCTGTAAATATTTTTTTGTTTAATACTAAGTCGGACAAGAAAAGTAAATAAAAATGTTCC
ATCTTACTCTACTCTACTTTATTATTCTCTTCCGTTGTTGTATTTTTGCTTCTTATTTTA
CAAGTGAACTGCTCCATTAATTGTACAACTTTCAAATTTTGAACCACAAATAATGAATAT
ATGTAATTGATCAAACAAATTAAATTTCCTTCATCTATTATTAAAGTGTTCGAATTTTAA
ATTTTGATTTTTCATGTTCTGTAAATTGTTTCAATTTCGTTCAAAATCGATGCACATTGT
TGTAATATCT

InterProScan

Gene3D
PX_dom_sf (IPR036871) - T[58-192] 3.2E-37
SMART
Phox (IPR001683) - T[62-180] 1.2E-20
SUPERFAMILY
PX_dom_sf (IPR036871) - T[63-181] 3.53E-31
ProSiteProfiles
Phox (IPR001683) - T[63-184] 17.32
Pfam
Phox (IPR001683) - T[67-178] 6.7E-24
Pfam
Vps5_C (IPR015404) - T[195-439] 7.3E-17
Gene3D
AH/BAR_dom_sf (IPR027267) - T[208-443] 7.2E-45
SUPERFAMILY
AH/BAR_dom_sf (IPR027267) - T[225-337] 5.23E-9 - T[372-443] 5.23E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNX2_HUMAN 26.5 % 122 4.04E-30
SNX30_HUMAN 40.31 % 318 8.53E-105
SNX7_HUMAN 38.889 % 306 3.88E-101