- Transcript 'Boschl.CG.Botznik201...' >
- Clone 'cien77491' >
- Clone 'cign064d12' >
- Transcript 'KH2012:KH.C8.734.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.734.v1.A.nonSL2-1
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
KhC8 [2,963,999 / 2,970,494]
Amino acid sequence
Length: 452
>KH.C8.734.v1.A.nonSL2-1
IINIMSSEKEEVVENTNLLDSDPLTQVDDEKSDLFDDDEGLVKSTTTEEATDPGSMTNEL
DSRDLFITVSNPEKHITTMETYITYKITTKTTRSIFDNSEYSVQRRYQDFVWLRNKLEEK
HETHLIPPLPSKFIMKGMLDRFNRQFTQTRCRALHNFLDRISRHSVISFDENLQVFLTAK
EFTAFRKQSESFMSRVGGSVKSISTAAVRLKDRDPEFDEVLNQVTQFGEKIGVLERVAER
LHAEKKEFVAELKEFSPTFSMWSASEDDVIAPIMTSTSSAVEACAEAAEANLKIHEFEYM
PPLREYVLYCDVVKQVLRRRDNFQLQHDKVVAELQRKQDEKENLPKSDQSYSVGALMGKS
ANEVKDQKELKLEQQIEEISKRRDDLNDKLECANANLRSDVDRWKVDKLHDMAQIFDDLA
DSQIQFHQQCLSAWEHILPAMQEKDQSTDYET
Nucleotide sequence
Length: 2,290
>KH2012:KH.C8.734.v1.A.nonSL2-1
ATTATAAATATCATGAGTTCTGAAAAAGAAGAAGTCGTTGAAAATACGAATTTGTTGGAT
TCGGATCCACTTACTCAAGTTGACGACGAAAAATCAGATTTGTTTGACGATGACGAGGGA
CTTGTTAAATCAACAACCACAGAAGAAGCAACGGATCCAGGTTCGATGACAAATGAACTT
GATTCAAGAGATCTTTTCATTACTGTCTCTAATCCAGAGAAACACATAACAACCATGGAA
ACCTATATTACTTATAAGATAACTACAAAGACCACCAGAAGTATATTTGACAACAGTGAA
TATTCAGTTCAGAGACGATATCAAGATTTTGTTTGGCTTCGTAATAAATTAGAAGAAAAG
CACGAAACCCATCTTATTCCACCTCTGCCATCTAAGTTTATAATGAAGGGAATGTTAGAT
CGTTTCAACCGTCAATTCACTCAAACTCGATGCAGGGCACTTCATAATTTCCTCGACCGA
ATATCCCGACATTCCGTCATTTCATTCGATGAAAATCTTCAAGTCTTCTTAACAGCTAAG
GAATTTACTGCGTTCCGGAAACAAAGTGAAAGTTTCATGTCTCGTGTCGGGGGGTCGGTG
AAATCTATTTCAACCGCTGCTGTGAGACTAAAAGATAGAGATCCTGAATTCGACGAGGTT
CTCAACCAAGTTACACAGTTTGGGGAGAAGATTGGAGTTTTGGAACGAGTTGCTGAGAGG
CTGCATGCGGAGAAAAAAGAATTTGTTGCCGAATTGAAAGAATTTTCGCCGACGTTTTCA
ATGTGGTCTGCTTCTGAGGATGATGTCATAGCACCCATTATGACATCAACAAGCAGTGCT
GTGGAAGCTTGTGCTGAAGCTGCTGAGGCTAATTTAAAGATTCATGAGTTTGAATACATG
CCTCCCTTGAGGGAGTATGTGTTATACTGCGACGTGGTGAAGCAAGTTTTAAGAAGACGA
GATAATTTTCAACTACAGCACGATAAAGTAGTGGCTGAACTACAAAGAAAACAAGATGAA
AAAGAAAATCTTCCAAAATCTGACCAATCATATTCTGTCGGGGCATTGATGGGAAAATCA
GCCAATGAGGTGAAAGATCAAAAAGAATTAAAACTCGAACAACAAATTGAGGAGATATCG
AAAAGAAGAGATGATTTAAACGACAAACTCGAATGTGCGAATGCAAATTTAAGATCAGAC
GTAGATCGTTGGAAAGTTGATAAACTGCATGACATGGCACAAATATTTGATGACTTGGCA
GATTCACAAATCCAATTTCATCAGCAGTGTCTATCTGCATGGGAACACATTCTACCTGCC
ATGCAAGAAAAAGATCAATCTACAGATTATGAGACTTAACTTCAAGTAGCAAATAGTTTT
CATATATTAAGTGATCTGTTCCATTGATGTTAGCTAGTATATTCTATATTGCTCAATTTT
CTAAATAGATTTGATTGAAAAGTTTCATAAAGATTTTTAGGTATAAAAAAGATTTGATAA
TTGGTGTCAATTTTTCAATGCTAAATTATCTTTCTAATGTAGTAACCAGTGGTTCTCAAC
CTAATTGCATCATTAACCTCTTAAACAGAATTGTATAAATTCTTGTGACTTGTCTTACAA
TTTAATTGAAGTGACTCAATTTACTTGTCCAAGTTTTATTGTGTGTTTACTGAAGTTAGG
TGTAGTTTCAAAAATCCGGTCGCAAAAGTTTTTCTGTTACTTTGTGTTTAGCGTTTGGGT
TATTTTTTGGGTGAGATTGTACAGCGAGGCACTAATTACACTAGCCTAATATTTGGGTCA
CTGCAAAAGGTTGAGAAGCACTGGTTTCAAATTTGGAGTATTAAATAAATGTCTTCACCA
AACTATATAGTACTGTGGAGTAAGATGGGATATCATAAGCATCTAAATCCCATACTGTTG
AATCGTGTTTTAAACAATTACCAACACTATATTAGGGGCACGAGGGTAGAGGTATTAAAA
TCTGTAAATATTTTTTTGTTTAATACTAAGTCGGACAAGAAAAGTAAATAAAAATGTTCC
ATCTTACTCTACTCTACTTTATTATTCTCTTCCGTTGTTGTATTTTTGCTTCTTATTTTA
CAAGTGAACTGCTCCATTAATTGTACAACTTTCAAATTTTGAACCACAAATAATGAATAT
ATGTAATTGATCAAACAAATTAAATTTCCTTCATCTATTATTAAAGTGTTCGAATTTTAA
ATTTTGATTTTTCATGTTCTGTAAATTGTTTCAATTTCGTTCAAAATCGATGCACATTGT
TGTAATATCT
| Gene3D |
PX_dom_sf (IPR036871) - T[58-192] 3.2E-37 |
| SMART |
Phox (IPR001683) - T[62-180] 1.2E-20 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[63-181] 3.53E-31 |
| ProSiteProfiles |
Phox (IPR001683) - T[63-184] 17.32 |
| Pfam |
Phox (IPR001683) - T[67-178] 6.7E-24 |
| Pfam |
Vps5_C (IPR015404) - T[195-439] 7.3E-17 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[208-443] 7.2E-45 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[225-337] 5.23E-9 - T[372-443] 5.23E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 26.5 % | 122 | 4.04E-30 |
| SNX30_HUMAN | 40.31 % | 318 | 8.53E-105 |
| SNX7_HUMAN | 38.889 % | 306 | 3.88E-101 |