- Clone 'cima865063' >
- Clone 'mae35f18' >
- Transcript 'KH2012:KH.C8.734.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.734.v1.A.SL3-1
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
KhC8 [2,963,989 / 2,970,494]
Amino acid sequence
Length: 455
>KH.C8.734.v1.A.SL3-1
NVIIINIMSSEKEEVVENTNLLDSDPLTQVDDEKSDLFDDDEGLVKSTTTEEATDPGSMT
NELDSRDLFITVSNPEKHITTMETYITYKITTKTTRSIFDNSEYSVQRRYQDFVWLRNKL
EEKHETHLIPPLPSKFIMKGMLDRFNRQFTQTRCRALHNFLDRISRHSVISFDENLQVFL
TAKEFTAFRKQSESFMSRVGGSVKSISTAAVRLKDRDPEFDEVLNQVTQFGEKIGVLERV
AERLHAEKKEFVAELKEFSPTFSMWSASEDDVIAPIMTSTSSAVEACAEAAEANLKIHEF
EYMPPLREYVLYCDVVKQVLRRRDNFQLQHDKVVAELQRKQDEKENLPKSDQSYSVGALM
GKSANEVKDQKELKLEQQIEEISKRRDDLNDKLECANANLRSDVDRWKVDKLHDMAQIFD
DLADSQIQFHQQCLSAWEHILPAMQEKDQSTDYET
Nucleotide sequence
Length: 2,300
>KH2012:KH.C8.734.v1.A.SL3-1
AAACGTAATCATTATAAATATCATGAGTTCTGAAAAAGAAGAAGTCGTTGAAAATACGAA
TTTGTTGGATTCGGATCCACTTACTCAAGTTGACGACGAAAAATCAGATTTGTTTGACGA
TGACGAGGGACTTGTTAAATCAACAACCACAGAAGAAGCAACGGATCCAGGTTCGATGAC
AAATGAACTTGATTCAAGAGATCTTTTCATTACTGTCTCTAATCCAGAGAAACACATAAC
AACCATGGAAACCTATATTACTTATAAGATAACTACAAAGACCACCAGAAGTATATTTGA
CAACAGTGAATATTCAGTTCAGAGACGATATCAAGATTTTGTTTGGCTTCGTAATAAATT
AGAAGAAAAGCACGAAACCCATCTTATTCCACCTCTGCCATCTAAGTTTATAATGAAGGG
AATGTTAGATCGTTTCAACCGTCAATTCACTCAAACTCGATGCAGGGCACTTCATAATTT
CCTCGACCGAATATCCCGACATTCCGTCATTTCATTCGATGAAAATCTTCAAGTCTTCTT
AACAGCTAAGGAATTTACTGCGTTCCGGAAACAAAGTGAAAGTTTCATGTCTCGTGTCGG
GGGGTCGGTGAAATCTATTTCAACCGCTGCTGTGAGACTAAAAGATAGAGATCCTGAATT
CGACGAGGTTCTCAACCAAGTTACACAGTTTGGGGAGAAGATTGGAGTTTTGGAACGAGT
TGCTGAGAGGCTGCATGCGGAGAAAAAAGAATTTGTTGCCGAATTGAAAGAATTTTCGCC
GACGTTTTCAATGTGGTCTGCTTCTGAGGATGATGTCATAGCACCCATTATGACATCAAC
AAGCAGTGCTGTGGAAGCTTGTGCTGAAGCTGCTGAGGCTAATTTAAAGATTCATGAGTT
TGAATACATGCCTCCCTTGAGGGAGTATGTGTTATACTGCGACGTGGTGAAGCAAGTTTT
AAGAAGACGAGATAATTTTCAACTACAGCACGATAAAGTAGTGGCTGAACTACAAAGAAA
ACAAGATGAAAAAGAAAATCTTCCAAAATCTGACCAATCATATTCTGTCGGGGCATTGAT
GGGAAAATCAGCCAATGAGGTGAAAGATCAAAAAGAATTAAAACTCGAACAACAAATTGA
GGAGATATCGAAAAGAAGAGATGATTTAAACGACAAACTCGAATGTGCGAATGCAAATTT
AAGATCAGACGTAGATCGTTGGAAAGTTGATAAACTGCATGACATGGCACAAATATTTGA
TGACTTGGCAGATTCACAAATCCAATTTCATCAGCAGTGTCTATCTGCATGGGAACACAT
TCTACCTGCCATGCAAGAAAAAGATCAATCTACAGATTATGAGACTTAACTTCAAGTAGC
AAATAGTTTTCATATATTAAGTGATCTGTTCCATTGATGTTAGCTAGTATATTCTATATT
GCTCAATTTTCTAAATAGATTTGATTGAAAAGTTTCATAAAGATTTTTAGGTATAAAAAA
GATTTGATAATTGGTGTCAATTTTTCAATGCTAAATTATCTTTCTAATGTAGTAACCAGT
GGTTCTCAACCTAATTGCATCATTAACCTCTTAAACAGAATTGTATAAATTCTTGTGACT
TGTCTTACAATTTAATTGAAGTGACTCAATTTACTTGTCCAAGTTTTATTGTGTGTTTAC
TGAAGTTAGGTGTAGTTTCAAAAATCCGGTCGCAAAAGTTTTTCTGTTACTTTGTGTTTA
GCGTTTGGGTTATTTTTTGGGTGAGATTGTACAGCGAGGCACTAATTACACTAGCCTAAT
ATTTGGGTCACTGCAAAAGGTTGAGAAGCACTGGTTTCAAATTTGGAGTATTAAATAAAT
GTCTTCACCAAACTATATAGTACTGTGGAGTAAGATGGGATATCATAAGCATCTAAATCC
CATACTGTTGAATCGTGTTTTAAACAATTACCAACACTATATTAGGGGCACGAGGGTAGA
GGTATTAAAATCTGTAAATATTTTTTTGTTTAATACTAAGTCGGACAAGAAAAGTAAATA
AAAATGTTCCATCTTACTCTACTCTACTTTATTATTCTCTTCCGTTGTTGTATTTTTGCT
TCTTATTTTACAAGTGAACTGCTCCATTAATTGTACAACTTTCAAATTTTGAACCACAAA
TAATGAATATATGTAATTGATCAAACAAATTAAATTTCCTTCATCTATTATTAAAGTGTT
CGAATTTTAAATTTTGATTTTTCATGTTCTGTAAATTGTTTCAATTTCGTTCAAAATCGA
TGCACATTGTTGTAATATCT
| Gene3D |
PX_dom_sf (IPR036871) - T[61-195] 3.2E-37 |
| SMART |
Phox (IPR001683) - T[65-183] 1.2E-20 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[66-184] 3.53E-31 |
| ProSiteProfiles |
Phox (IPR001683) - T[66-187] 17.32 |
| Pfam |
Phox (IPR001683) - T[70-181] 6.8E-24 |
| Pfam |
Vps5_C (IPR015404) - T[198-442] 7.4E-17 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[211-446] 7.3E-45 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[228-340] 4.97E-9 - T[375-446] 4.97E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 26.5 % | 122 | 4.87E-30 |
| SNX30_HUMAN | 40.31 % | 318 | 9.0E-105 |
| SNX7_HUMAN | 38.889 % | 306 | 5.03E-101 |