Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.87.v3.A.SL1-3

Possible name(s)

SLC6A11; SLC6A12; SLC6A13

Gene model

KH2012:KH.C8.87

Location

KhC8 [3,965,688 / 3,967,568]

Sequences

Amino acid sequence

Length: 206

>KH.C8.87.v3.A.SL1-3
RIPIIYTVLCTKTDMSEKKTDSGETKRETWGGKQEFILALIGYSVGLGNVWRFPYLCYDN
GGGAFLIPYAIFVVLAGIPLFFLEISLGQYTQQSCVKVWSKLVPAMKGIGYGSAVVNFMC
AIYFVLVMSWSVLYFVHSCIPGPLPWTSCGNWWNSEHCVLNANYKGMNATMLQQVSNTSG
FASALHTTPNKTNNTTIYSPENEFWK

Nucleotide sequence

Length: 763

>KH2012:KH.C8.87.v3.A.SL1-3
GCGAATACCGATAATATATACTGTATTGTGTACAAAAACTGATATGTCGGAGAAAAAAAC
GGACTCGGGAGAGACAAAGAGAGAAACATGGGGAGGAAAGCAGGAGTTTATCCTGGCTTT
AATTGGCTACTCGGTTGGTCTTGGAAATGTATGGAGGTTTCCTTATCTGTGTTACGATAA
CGGTGGAGGAGCATTTTTAATTCCCTACGCGATTTTCGTTGTATTGGCGGGCATTCCTTT
GTTCTTTCTGGAAATTTCTTTGGGCCAATACACACAACAAAGCTGCGTAAAAGTCTGGAG
CAAACTAGTTCCAGCCATGAAGGGTATCGGGTACGGATCAGCCGTCGTAAACTTTATGTG
CGCTATCTACTTTGTGCTTGTCATGTCATGGTCGGTGCTATACTTTGTGCATTCATGTAT
TCCTGGACCTCTCCCTTGGACATCATGCGGAAATTGGTGGAACTCTGAACATTGTGTTTT
GAATGCAAACTATAAAGGAATGAATGCTACTATGCTTCAGCAGGTTTCAAATACGTCCGG
TTTCGCTTCTGCGCTTCACACCACCCCCAATAAAACCAACAACACGACAATATATTCTCC
TGAAAACGAGTTTTGGAAGTAAGCACATGAATGCAGTTGTTGCACCTCGTTTCACTGACA
TAACAACTGTTGTTTTATAGCAATTACGTTTTAAGAAAATCGGATGGAATTGAAAATATT
GGCAGTTTAGAAAACTGGCCGCTTATTCTTTGCTTTTTTGGTT

InterProScan

PANTHER	Na/ntran_symport (IPR000175) - T[25-205] 2.2E-62
ProSiteProfiles	Na/ntran_symport (IPR000175) - T[26-206] 32.439
Pfam	Na/ntran_symport (IPR000175) - T[27-178] 1.3E-60
SUPERFAMILY	SNS_sf (IPR037272) - T[27-158] 7.06E-56
PRINTS	Na/ntran_symport (IPR000175) - T[35-56] 2.2E-30 - T[64-83] 2.2E-30 - T[108-134] 2.2E-30
ProSitePatterns	Na/ntran_symport (IPR000175) - T[51-65] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
S6A13_HUMAN	48.252 %	155	1.36E-44
S6A11_HUMAN	40.426 %	157	3.58E-45
SC6A4_HUMAN	51.852 %	163	2.71E-47