- Clone 'cicl078c12' >
- Transcript 'KH2012:KH.C8.892.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.892.v1.A.nonSL1-1
Possible name(s)
TUBA1C; TUBA3C; TUBA3D
Gene model
Location
KhC8 [4,974,175 / 4,977,263]
Amino acid sequence
Length: 461
>KH.C8.892.v1.A.nonSL1-1
SLFFLLHVNMRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGSGDDSFNT
FFSETGSGKHVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQMITGKEDAANNYARGHYTIG
KEIVDTVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAV
YPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVDRPSYTNLNRLI
GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVGEI
TNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIASIKTKRTIQFVDWCPTGF
KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
GMEEGEFSEAREDLAALEKDYEEVGVDTADGDGDEDEEDEY
Nucleotide sequence
Length: 1,889
>KH2012:KH.C8.892.v1.A.nonSL1-1
ATTCACCAAGATCAACTACAGCTGCGTAACGAAGCTATATTTATATTCTGTTGAAGTCTA
TTCTTTTTACTACACGTCAATATGCGCGAATGTATCTCCATCCACGTCGGCCAAGCCGGA
GTTCAGATCGGTAACGCTTGCTGGGAGTTGTACTGCCTCGAGCATGGCATTCAACCAGAC
GGTCAAATGCCAAGCGATAAAACTGTCGGCAGTGGCGATGACTCGTTCAACACTTTCTTC
AGCGAGACCGGTTCAGGAAAACACGTCCCACGAGCCGTATTTGTTGATTTAGAACCTACC
GTAGTGGACGAAATCCGCACTGGTACTTACCGCCAGTTGTTCCACCCTGAGCAAATGATT
ACTGGAAAAGAAGATGCCGCAAATAACTATGCAAGAGGTCACTACACTATTGGTAAAGAG
ATTGTGGACACTGTTCTCGATCGTATCCGAAAGTTGGCCGACCAATGCACAGGTCTGCAA
GGTTTTCTCATTTTTCACTCTTTCGGTGGTGGAACCGGCTCCGGTTTTGCGTCTCTATTG
ATGGAAAGACTTTCCGTCGATTATGGGAAGAAATCAAAGCTGGAGTTCGCGGTCTACCCA
GCACCGCAGGTTTCAACCGCAGTGGTGGAACCTTACAATTCCATCTTGACCACTCATACC
ACCCTTGAGCATTCCGATTGCGCATTTATGGTCGACAACGAGGCAATCTACGATATCTGC
CGTAGAAACCTTGACGTTGACCGTCCATCTTACACCAACCTCAACCGTCTGATCGGTCAA
ATCGTTTCTTCAATCACTGCTTCCCTGCGTTTCGACGGGGCTCTCAACGTCGATTTGACA
GAGTTTCAGACCAACTTGGTGCCATACCCTCGCATCCATTTCCCGTTGGTCACCTACGCT
CCGGTCATCTCGGCAGAAAAAGCTTATCACGAGCAGCTTTCCGTTGGCGAAATCACCAAT
GCTTGTTTTGAGCCCGCTAACCAGATGGTGAAATGCGATCCCCGCCATGGCAAGTACATG
GCATGTTGTATGCTTTACCGTGGCGATGTTGTACCGAAGGACGTCAATGCTGCTATTGCT
TCTATTAAAACGAAACGTACAATTCAGTTCGTCGACTGGTGCCCCACTGGTTTCAAGGTT
GGTATAAACTACCAGCCACCCACCGTTGTACCAGGTGGTGATCTGGCAAAGGTCCAACGG
GCCGTCTGCATGTTGAGCAACACCACAGCTATTGCTGAAGCTTGGGCTCGTCTCGATCAC
AAGTTTGACTTGATGTACGCCAAGCGAGCATTCGTTCACTGGTATGTCGGCGAGGGAATG
GAAGAAGGAGAATTCTCGGAGGCTCGTGAGGATCTCGCTGCTCTAGAGAAAGATTACGAA
GAGGTTGGAGTCGATACTGCAGATGGAGATGGCGACGAAGACGAAGAGGACGAATATTAA
TTTAATCACGAAGCACTCGAGTTCCAATGTTTAATGTTATAAGCCTTTGCCTCTCACGAT
GCAACGAATTCTTTCTTTCTTTTCCACACGAAACGCATGGTGAAATTGCTCATTCTGGTT
TTCATTCCTATTAATTACGGTTACTGCCCCCGGATCTGAAATAAACACGACCGTTGGAAA
CTTGGCGTGCTTGTTGTGACTTCTTTAACTTTTATGATCGAAGAGATTAATATAGCGGTT
CTGCCGCACCTCCTCTGTTTGGGTAGAAATGCTTTTGCTGAGTTATCCTCTTGCAAAAAT
AAGCAACGCCCGTGGTTTTAACATACCTGCTATCAACTAAACGGCTATTCCCGTTATTAG
GTGTGCTTTTTTTATCAGCAGCATCTGCATTGATTTACATTTTCGGTACCAGTATACAAC
CTTCTTTCTATCTGCTGGTGAAGTTTTCA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[10-277] 9.8E-133 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[10-253] 2.75E-102 |
| PANTHER |
Tubulin (IPR000217) - T[11-456] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[12-222] 2.8E-69 |
| PRINTS |
Tubulin (IPR000217) - T[19-39] 4.9E-91 - T[62-81] 4.9E-91 - T[104-115] 4.9E-91 - T[117-141] 4.9E-91 - T[143-161] 4.9E-91 - T[162-183] 4.9E-91 - T[187-200] 4.9E-91 - T[201-221] 4.9E-91 - T[389-417] 4.9E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[27-42] 9.4E-119 - T[54-67] 9.4E-119 - T[97-110] 9.4E-119 - T[129-137] 9.4E-119 - T[157-169] 9.4E-119 - T[170-181] 9.4E-119 - T[223-235] 9.4E-119 - T[283-298] 9.4E-119 - T[330-351] 9.4E-119 - T[356-369] 9.4E-119 - T[369-388] 9.4E-119 - T[394-410] 9.4E-119 - T[431-447] 9.4E-119 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[58-255] 5.5E-84 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[151-157] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[255-445] 1.1E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[257-402] 1.3E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[272-400] 4.4E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[278-392] 3.7E-67 |
| Gene3D |
Tubulin_C (IPR023123) - T[393-460] 3.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 96.583 % | 876 | 0 |
| TBA3D_HUMAN | 96.583 % | 876 | 0 |
| TBA1C_HUMAN | 93.363 % | 875 | 0 |