Aniseed - Transcript Card

Transcript 'Phmamm.CG.MTP2014.S4...' >
Transcript 'KH2012:KH.C8.97.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.97.v1.A.nonSL8-2

Possible name(s)

MARCH1; MARCH11; MARCH5

Gene model

KH2012:KH.C8.97

Location

KhC8 [966,400 / 968,969]

Sequences

Amino acid sequence

Length: 332

>KH.C8.97.v1.A.nonSL8-2
KSSSDCILFQKLPGRCRVYTSLSYSLSIMDISNSATEQNEDQVNPIPTPPVQNVAPDNPD
TSKSCWVCFGSESDDITAVWIRPCRCRGTTKWVHHNCLMRWVDEKQKGHSYTKVHCPQCN
TEYVITFPPFGKFCGIIQTVDRMIYKASPLIATGVLLGSVYWTAVTYGAITVMQVLGHKE
GLDMMERADPLFLLIGLPAIPVGLVLGKMIQWDEYLLRVWRRHAHKLGILNYLFPMNTYG
TVRPTQPHEAPAREIKFTRVFCGAMLFPTIATIVGKLGFRKVDGNLQRSFLGGIAFVAIK
GILKIYLKQQIYSRLGQRRITNYEHTDSGTPT

Nucleotide sequence

Length: 1,235

>KH2012:KH.C8.97.v1.A.nonSL8-2
GAATTATGAAAAAGCAGCAGTGATTGTATTCTGTTTCAAAAACTTCCTGGTCGCTGTCGT
GTATATACGTCTTTATCGTACAGCCTTAGTATAATGGACATTTCAAATTCAGCAACTGAA
CAAAACGAAGACCAAGTCAATCCAATACCCACTCCACCCGTTCAGAATGTAGCCCCTGAT
AATCCAGACACGTCAAAAAGCTGTTGGGTCTGTTTTGGTAGCGAGTCAGATGACATTACG
GCTGTGTGGATTCGGCCATGCAGATGCAGGGGTACTACAAAGTGGGTCCATCACAATTGC
TTAATGCGCTGGGTTGACGAGAAACAAAAAGGTCATTCATACACTAAAGTTCACTGTCCA
CAATGCAACACAGAGTATGTTATAACATTCCCACCCTTTGGTAAATTTTGTGGCATAATT
CAAACTGTGGACAGAATGATATACAAAGCATCCCCTCTTATTGCAACTGGTGTTTTGCTT
GGTTCTGTTTACTGGACCGCTGTAACATATGGTGCTATTACTGTTATGCAGGTTTTAGGT
CACAAAGAAGGTTTGGACATGATGGAAAGAGCTGATCCACTGTTCCTACTTATTGGGTTG
CCAGCCATACCTGTTGGCTTGGTGTTGGGCAAAATGATACAGTGGGATGAGTATCTACTT
CGAGTGTGGAGGCGTCACGCCCACAAGCTTGGTATTCTTAACTACCTCTTCCCAATGAAT
ACTTATGGAACTGTACGCCCCACTCAACCACACGAGGCACCAGCGAGAGAGATAAAGTTC
ACCAGAGTTTTCTGTGGTGCAATGTTGTTTCCAACAATAGCTACAATCGTGGGTAAACTC
GGCTTCAGAAAAGTGGATGGTAACCTTCAACGAAGCTTTTTGGGTGGAATAGCTTTTGTT
GCGATCAAAGGGATCCTGAAGATTTACCTCAAGCAGCAAATATATTCACGTCTTGGCCAA
CGCAGAATCACAAATTACGAACACACAGATAGTGGAACGCCTACTTGAACAAATACATGC
AGCATACACTGTCTATTGCGCAAATTTTACACTAAGTTTAAAAGTAATTATCACTAGTGC
ATGGAGTAAAGTTTTTTTCTTGTTGAATTCAGATTATTTTAATGAAACTGCGCCATCCTG
CTTGCTATGCCGCAATTAAATGGTATACTGTGTGTTTTGTTGTTCTGTATAATCCTGTTG
GTATTTTTCAATATACAAATTTAATCTGTAGGCTA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[52-129] 9.1E-17
ProSiteProfiles	Znf_RING-CH (IPR011016) - T[57-126] 20.851
PANTHER	MARCH-like (IPR033275) - T[62-325] 2.9E-108
SMART	Znf_RING-CH (IPR011016) - T[64-120] 1.6E-16
Pfam	Znf_RING-CH (IPR011016) - T[65-119] 2.2E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARH5_HUMAN	60.37 %	353	6.53E-123