Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.97.v1.A.SL1-2

Possible name(s)

MARCH1; MARCH11; MARCH5

Gene model

KH2012:KH.C8.97

Location

KhC8 [966,417 / 968,969]

Sequences

Amino acid sequence

Length: 329

>KH.C8.97.v1.A.SL1-2
SDCILFQKLPGRCRVYTSLSYSLSIMDISNSATEQNEDQVNPIPTPPVQNVAPDNPDTSK
SCWVCFGSESDDITAVWIRPCRCRGTTKWVHHNCLMRWVDEKQKGHSYTKVHCPQCNTEY
VITFPPFGKFCGIIQTVDRMIYKASPLIATGVLLGSVYWTAVTYGAITVMQVLGHKEGLD
MMERADPLFLLIGLPAIPVGLVLGKMIQWDEYLLRVWRRHAHKLGILNYLFPMNTYGTVR
PTQPHEAPAREIKFTRVFCGAMLFPTIATIVGKLGFRKVDGNLQRSFLGGIAFVAIKGIL
KIYLKQQIYSRLGQRRITNYEHTDSGTPT

Nucleotide sequence

Length: 1,218

>KH2012:KH.C8.97.v1.A.SL1-2
CAGTGATTGTATTCTGTTTCAAAAACTTCCTGGTCGCTGTCGTGTATATACGTCTTTATC
GTACAGCCTTAGTATAATGGACATTTCAAATTCAGCAACTGAACAAAACGAAGACCAAGT
CAATCCAATACCCACTCCACCCGTTCAGAATGTAGCCCCTGATAATCCAGACACGTCAAA
AAGCTGTTGGGTCTGTTTTGGTAGCGAGTCAGATGACATTACGGCTGTGTGGATTCGGCC
ATGCAGATGCAGGGGTACTACAAAGTGGGTCCATCACAATTGCTTAATGCGCTGGGTTGA
CGAGAAACAAAAAGGTCATTCATACACTAAAGTTCACTGTCCACAATGCAACACAGAGTA
TGTTATAACATTCCCACCCTTTGGTAAATTTTGTGGCATAATTCAAACTGTGGACAGAAT
GATATACAAAGCATCCCCTCTTATTGCAACTGGTGTTTTGCTTGGTTCTGTTTACTGGAC
CGCTGTAACATATGGTGCTATTACTGTTATGCAGGTTTTAGGTCACAAAGAAGGTTTGGA
CATGATGGAAAGAGCTGATCCACTGTTCCTACTTATTGGGTTGCCAGCCATACCTGTTGG
CTTGGTGTTGGGCAAAATGATACAGTGGGATGAGTATCTACTTCGAGTGTGGAGGCGTCA
CGCCCACAAGCTTGGTATTCTTAACTACCTCTTCCCAATGAATACTTATGGAACTGTACG
CCCCACTCAACCACACGAGGCACCAGCGAGAGAGATAAAGTTCACCAGAGTTTTCTGTGG
TGCAATGTTGTTTCCAACAATAGCTACAATCGTGGGTAAACTCGGCTTCAGAAAAGTGGA
TGGTAACCTTCAACGAAGCTTTTTGGGTGGAATAGCTTTTGTTGCGATCAAAGGGATCCT
GAAGATTTACCTCAAGCAGCAAATATATTCACGTCTTGGCCAACGCAGAATCACAAATTA
CGAACACACAGATAGTGGAACGCCTACTTGAACAAATACATGCAGCATACACTGTCTATT
GCGCAAATTTTACACTAAGTTTAAAAGTAATTATCACTAGTGCATGGAGTAAAGTTTTTT
TCTTGTTGAATTCAGATTATTTTAATGAAACTGCGCCATCCTGCTTGCTATGCCGCAATT
AAATGGTATACTGTGTGTTTTGTTGTTCTGTATAATCCTGTTGGTATTTTTCAATATACA
AATTTAATCTGTAGGCTA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[49-126] 8.9E-17
ProSiteProfiles	Znf_RING-CH (IPR011016) - T[54-123] 20.851
PANTHER	MARCH-like (IPR033275) - T[59-322] 2.8E-108
SMART	Znf_RING-CH (IPR011016) - T[61-117] 1.6E-16
Pfam	Znf_RING-CH (IPR011016) - T[62-116] 2.2E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARH5_HUMAN	60.37 %	353	5.35E-123