Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.97.v1.A.SL6-2

Possible name(s)

MARCH1; MARCH11; MARCH5

Gene model

KH2012:KH.C8.97

Location

KhC8 [966,483 / 968,969]

Sequences

Amino acid sequence

Length: 307

>KH.C8.97.v1.A.SL6-2
LSIMDISNSATEQNEDQVNPIPTPPVQNVAPDNPDTSKSCWVCFGSESDDITAVWIRPCR
CRGTTKWVHHNCLMRWVDEKQKGHSYTKVHCPQCNTEYVITFPPFGKFCGIIQTVDRMIY
KASPLIATGVLLGSVYWTAVTYGAITVMQVLGHKEGLDMMERADPLFLLIGLPAIPVGLV
LGKMIQWDEYLLRVWRRHAHKLGILNYLFPMNTYGTVRPTQPHEAPAREIKFTRVFCGAM
LFPTIATIVGKLGFRKVDGNLQRSFLGGIAFVAIKGILKIYLKQQIYSRLGQRRITNYEH
TDSGTPT

Nucleotide sequence

Length: 1,152

>KH2012:KH.C8.97.v1.A.SL6-2
CCTTAGTATAATGGACATTTCAAATTCAGCAACTGAACAAAACGAAGACCAAGTCAATCC
AATACCCACTCCACCCGTTCAGAATGTAGCCCCTGATAATCCAGACACGTCAAAAAGCTG
TTGGGTCTGTTTTGGTAGCGAGTCAGATGACATTACGGCTGTGTGGATTCGGCCATGCAG
ATGCAGGGGTACTACAAAGTGGGTCCATCACAATTGCTTAATGCGCTGGGTTGACGAGAA
ACAAAAAGGTCATTCATACACTAAAGTTCACTGTCCACAATGCAACACAGAGTATGTTAT
AACATTCCCACCCTTTGGTAAATTTTGTGGCATAATTCAAACTGTGGACAGAATGATATA
CAAAGCATCCCCTCTTATTGCAACTGGTGTTTTGCTTGGTTCTGTTTACTGGACCGCTGT
AACATATGGTGCTATTACTGTTATGCAGGTTTTAGGTCACAAAGAAGGTTTGGACATGAT
GGAAAGAGCTGATCCACTGTTCCTACTTATTGGGTTGCCAGCCATACCTGTTGGCTTGGT
GTTGGGCAAAATGATACAGTGGGATGAGTATCTACTTCGAGTGTGGAGGCGTCACGCCCA
CAAGCTTGGTATTCTTAACTACCTCTTCCCAATGAATACTTATGGAACTGTACGCCCCAC
TCAACCACACGAGGCACCAGCGAGAGAGATAAAGTTCACCAGAGTTTTCTGTGGTGCAAT
GTTGTTTCCAACAATAGCTACAATCGTGGGTAAACTCGGCTTCAGAAAAGTGGATGGTAA
CCTTCAACGAAGCTTTTTGGGTGGAATAGCTTTTGTTGCGATCAAAGGGATCCTGAAGAT
TTACCTCAAGCAGCAAATATATTCACGTCTTGGCCAACGCAGAATCACAAATTACGAACA
CACAGATAGTGGAACGCCTACTTGAACAAATACATGCAGCATACACTGTCTATTGCGCAA
ATTTTACACTAAGTTTAAAAGTAATTATCACTAGTGCATGGAGTAAAGTTTTTTTCTTGT
TGAATTCAGATTATTTTAATGAAACTGCGCCATCCTGCTTGCTATGCCGCAATTAAATGG
TATACTGTGTGTTTTGTTGTTCTGTATAATCCTGTTGGTATTTTTCAATATACAAATTTA
ATCTGTAGGCTA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[27-104] 7.9E-17
ProSiteProfiles	Znf_RING-CH (IPR011016) - T[32-101] 20.851
PANTHER	MARCH-like (IPR033275) - T[37-300] 2.3E-108
SMART	Znf_RING-CH (IPR011016) - T[39-95] 1.6E-16
Pfam	Znf_RING-CH (IPR011016) - T[40-94] 1.9E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARH5_HUMAN	60.37 %	353	2.84E-123