Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.97.v2.A.nonSL5-1

Possible name(s)

MARCH1; MARCH11; MARCH5

Gene model

KH2012:KH.C8.97

Location

KhC8 [966,398 / 967,270]

Sequences

Amino acid sequence

Length: 181

>KH.C8.97.v2.A.nonSL5-1
KSSSDCILFQKLPGRCRVYTSLSYSLSIMDISNSATEQNEDQVNPIPTPPVQNVAPDNPD
TSKSCWVCFGSESDDITAVWIRPCRCRGTTKWVHHNCLMRWVDEKQKGHSYTKVHCPQCN
TEYVITFPPFGKFCGIIQTVDRMIYKASPLIATGVLLGSVYWTAVTYGAITVMQVLKIQS
I

Nucleotide sequence

Length: 714

>KH2012:KH.C8.97.v2.A.nonSL5-1
GTGAATTATGAAAAAGCAGCAGTGATTGTATTCTGTTTCAAAAACTTCCTGGTCGCTGTC
GTGTATATACGTCTTTATCGTACAGCCTTAGTATAATGGACATTTCAAATTCAGCAACTG
AACAAAACGAAGACCAAGTCAATCCAATACCCACTCCACCCGTTCAGAATGTAGCCCCTG
ATAATCCAGACACGTCAAAAAGCTGTTGGGTCTGTTTTGGTAGCGAGTCAGATGACATTA
CGGCTGTGTGGATTCGGCCATGCAGATGCAGGGGTACTACAAAGTGGGTCCATCACAATT
GCTTAATGCGCTGGGTTGACGAGAAACAAAAAGGTCATTCATACACTAAAGTTCACTGTC
CACAATGCAACACAGAGTATGTTATAACATTCCCACCCTTTGGTAAATTTTGTGGCATAA
TTCAAACTGTGGACAGAATGATATACAAAGCATCCCCTCTTATTGCAACTGGTGTTTTGC
TTGGTTCTGTTTACTGGACCGCTGTAACATATGGTGCTATTACTGTTATGCAGGTATTAA
AAATTCAAAGCATCTGAAACGTAGGTATAGTCTACAATGTAAATTTGTACCAATTTGCTT
TTGAGTGGCAGTAGTATGTTACGTCAGGCGCTGCAAAGTGGTTAACGAGTCTGGCTGTAA
CCCAGAGGTAATGGGTTGTGTCTTTGGGCAAGACACTTAACGGCAATTGCTCCA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[52-129] 2.8E-17
ProSiteProfiles	Znf_RING-CH (IPR011016) - T[57-126] 20.851
PANTHER	MARCH-like (IPR033275) - T[62-176] 2.3E-41
SMART	Znf_RING-CH (IPR011016) - T[64-120] 1.6E-16
Pfam	Znf_RING-CH (IPR011016) - T[65-119] 7.7E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARH5_HUMAN	61.404 %	169	9.92E-53