Aniseed - Transcript Card

Transcript 'KH2012:KH.C8.97.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.97.v2.A.SL6-1

Possible name(s)

MARCH1; MARCH11; MARCH5

Gene model

KH2012:KH.C8.97

Location

KhC8 [966,483 / 967,270]

Sequences

Amino acid sequence

Length: 156

>KH.C8.97.v2.A.SL6-1
LSIMDISNSATEQNEDQVNPIPTPPVQNVAPDNPDTSKSCWVCFGSESDDITAVWIRPCR
CRGTTKWVHHNCLMRWVDEKQKGHSYTKVHCPQCNTEYVITFPPFGKFCGIIQTVDRMIY
KASPLIATGVLLGSVYWTAVTYGAITVMQVLKIQSI

Nucleotide sequence

Length: 629

>KH2012:KH.C8.97.v2.A.SL6-1
CCTTAGTATAATGGACATTTCAAATTCAGCAACTGAACAAAACGAAGACCAAGTCAATCC
AATACCCACTCCACCCGTTCAGAATGTAGCCCCTGATAATCCAGACACGTCAAAAAGCTG
TTGGGTCTGTTTTGGTAGCGAGTCAGATGACATTACGGCTGTGTGGATTCGGCCATGCAG
ATGCAGGGGTACTACAAAGTGGGTCCATCACAATTGCTTAATGCGCTGGGTTGACGAGAA
ACAAAAAGGTCATTCATACACTAAAGTTCACTGTCCACAATGCAACACAGAGTATGTTAT
AACATTCCCACCCTTTGGTAAATTTTGTGGCATAATTCAAACTGTGGACAGAATGATATA
CAAAGCATCCCCTCTTATTGCAACTGGTGTTTTGCTTGGTTCTGTTTACTGGACCGCTGT
AACATATGGTGCTATTACTGTTATGCAGGTATTAAAAATTCAAAGCATCTGAAACGTAGG
TATAGTCTACAATGTAAATTTGTACCAATTTGCTTTTGAGTGGCAGTAGTATGTTACGTC
AGGCGCTGCAAAGTGGTTAACGAGTCTGGCTGTAACCCAGAGGTAATGGGTTGTGTCTTT
GGGCAAGACACTTAACGGCAATTGCTCCA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[26-104] 1.5E-17
ProSiteProfiles	Znf_RING-CH (IPR011016) - T[32-101] 20.851
PANTHER	MARCH-like (IPR033275) - T[37-151] 1.6E-41
SMART	Znf_RING-CH (IPR011016) - T[39-95] 1.6E-16
Pfam	Znf_RING-CH (IPR011016) - T[40-94] 5.7E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARH5_HUMAN	61.404 %	169	4.86E-53