Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.10.v1.A.SL1-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,390]

Sequences

Amino acid sequence

Length: 284

>KH.C9.10.v1.A.SL1-1
ISVMLTEIVQKNLVTSCCQNCIYQKLIIYIYKFILNQVRGVGAGGVVSTSFCILFKLFTL
KLTRKQVNGLLNHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCVM
TIGMMVRTVLTKLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNED
RGSRAASLKSKSPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHDR
KRRSRDKDSRRRSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,646

>KH2012:KH.C9.10.v1.A.SL1-1
GTATTTAGCAAATTTAGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATT
ATCAGGATGGTGAACAGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACAT
GTTGGGGTTGACCATTTAGAGCCCTGGGAAAGAGGAACAAGGAAAACTGCCGGCCAAACT
GGGATGTGTGGTGGAGTATGTTTATTTGTTTTTATTTTGTATTATTATCCTAATTTTAAT
TTATTTTTCGCATACATTTTGGTCTGTACAAACTACAAACTAATTGAATCAGTGTAATGC
TTACAGAAATTGTCCAAAAAAATCTTGTCACCTCGTGTTGTCAAAATTGTATTTACCAAA
AATTAATTATATATATATATAAATTTATTCTCAACCAGGTAAGAGGTGTTGGAGCTGGTG
GTGTCGTTTCCACTTCTTTCTGCATTTTGTTCAAACTTTTCACTTTGAAACTCACACGCA
AACAAGTAAATGGACTTCTCAACCACACTGACTCACCGTATATAAGAGGCCTAGGAGTTA
TGTACATTAGATACACTCAAGCACCCAAGGATTTATGGCATTGGTTGGAAGCTTACTTGG
AAGATGAAGAGGAAATAGATGTGAAGGCAGGAGGGGGTTGTGTGATGACCATAGGAATGA
TGGTAAGAACTGTACTCACTAAACTTGAATGGTTTTCAACTCTGTTCCCAAGAATACCTG
TCCCAATACAAAAGCTCATTGATGAAAATTTAAGTGCGTATGGATTGACTGGACTACGTA
GAGGAAGAGATGAACCATCTGAAGATTATGAGCAATACAATGAAGACCGTGGCAGCAGAG
CTGCTTCTTTAAAAAGCAAATCACCAGAGCACAGATCAAGTAGAGACAGGAGCAGTCGAC
ACCGATCCCCTGAAGTTCGTCGTAAAAGAAGTCGGTCCCGCGGCCACAGTCGATCCCGTG
ATGACGGTCACCGTCGCCATGAGAAGGTTAGAAGTTCACATGATAGAAAGCGTAGATCAC
GTGATAAAGATTCACGGAGAAGAAGTTATGAGCGTTCATCTAGACATCGAAGCAGATCCC
GTGAAAGGCATCGTAGAAGATCTCGAAGTATTGAAAGAGAACGTTCCTACCGTTCCCGTT
GAAAGTTTGAATATTTTAATTCTTTTACAAACAACAATGTGATGACGTGGGGGAGATTTT
ACACCAGACATCATAAAAAAACAAAACTCCTTAGAGCTTCATGCTTTTTATGTTTTGAAT
TTTAATGCGATACTTTTGAGTTCATATTTACCAGATATCAAAAGTTAAAGAAAAAAACAC
TGACTTTATATTTAGAACAATACAAACTTATAAAACATCATATGTAAAATAAATTCTACC
TGCCACACAATTAAAATTACTGAACAGGCAAAGAAAAAACAGAATCTGCTGTATTGTCAA
TACGTGATTGTACATTGTAACTGTAAACAATACAGTTGTTTTGTTTATAGTTGATTGGGG
AGGAACTTTGCTGTGGCACATCTTTCGAATTCCGTTTGCAAATGTTTACATTAAAGCGGG
TTCAGTTAATTCGCACTTTTATAAAAACTAAACACAAAGTGGGAAACTAGATAATAGGAA
ATACCATTCGTGTTCCATATAATGTT

InterProScan

Pfam	PRP38 (IPR005037) - T[19-150] 2.0E-35
PANTHER	PRP38 (IPR005037) - T[40-284] 7.4E-79

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PR38B_HUMAN	75.926 %	197	3.01E-59