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TRANSCRIPT CARD

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  1. Region 'REG00001292' > 
  2. Transcript 'KH2012:KH.C7.492.v1....' > 
  3. Transcript 'KH2012:KH.C9.10.v1.A...' > 
  4. Transcript 'KH2012:KH.L153.22.v1...' > 
  5. Transcript 'KH2012:KH.C9.10.v3.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.10.v3.A.SL1-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,390]

Sequences

Amino acid sequence

Length: 393

>KH.C9.10.v3.A.SL1-1
DRMDEQYDEENYQDGEQESYEARPKLGNTLTCWGNPRTMNLNHLVLTNVQNSPYFKVRLF
ELKTYHEVVDEIYYKVRQGNMKSGPGSAHPWVTAASIYSFLIKNLQLKFNNNIIRKLTFS
LKQVDHLEPWERGTRKTAGQTGMCGGVRGVGAGGVVSTSFCILFKLFTLKLTRKQVNGLL
NHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCVMTIGMMVRTVLT
KLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNEDRGSRAASLKSK
SPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHDRKRRSRDKDSRR
RSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,712

>KH2012:KH.C9.10.v3.A.SL1-1
GTATTTAGCAAATTTAGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATT
ATCAGGATGGTGAACAGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACAT
GTTGGGGTAATCCTCGAACAATGAATTTGAATCATCTCGTACTTACAAATGTGCAGAATT
CCCCTTATTTTAAAGTTCGCCTTTTCGAACTGAAAACTTATCATGAGGTTGTTGATGAGA
TTTATTATAAGGTGCGTCAAGGAAATATGAAGTCGGGTCCTGGCAGTGCTCATCCATGGG
TTACTGCTGCATCGATATATTCATTTTTAATAAAAAATTTACAACTAAAGTTTAACAACA
ATATCATAAGAAAATTAACATTCTCCCTGAAACAGGTTGACCATTTAGAGCCCTGGGAAA
GAGGAACAAGGAAAACTGCCGGCCAAACTGGGATGTGTGGTGGAGTAAGAGGTGTTGGAG
CTGGTGGTGTCGTTTCCACTTCTTTCTGCATTTTGTTCAAACTTTTCACTTTGAAACTCA
CACGCAAACAAGTAAATGGACTTCTCAACCACACTGACTCACCGTATATAAGAGGCCTAG
GAGTTATGTACATTAGATACACTCAAGCACCCAAGGATTTATGGCATTGGTTGGAAGCTT
ACTTGGAAGATGAAGAGGAAATAGATGTGAAGGCAGGAGGGGGTTGTGTGATGACCATAG
GAATGATGGTAAGAACTGTACTCACTAAACTTGAATGGTTTTCAACTCTGTTCCCAAGAA
TACCTGTCCCAATACAAAAGCTCATTGATGAAAATTTAAGTGCGTATGGATTGACTGGAC
TACGTAGAGGAAGAGATGAACCATCTGAAGATTATGAGCAATACAATGAAGACCGTGGCA
GCAGAGCTGCTTCTTTAAAAAGCAAATCACCAGAGCACAGATCAAGTAGAGACAGGAGCA
GTCGACACCGATCCCCTGAAGTTCGTCGTAAAAGAAGTCGGTCCCGCGGCCACAGTCGAT
CCCGTGATGACGGTCACCGTCGCCATGAGAAGGTTAGAAGTTCACATGATAGAAAGCGTA
GATCACGTGATAAAGATTCACGGAGAAGAAGTTATGAGCGTTCATCTAGACATCGAAGCA
GATCCCGTGAAAGGCATCGTAGAAGATCTCGAAGTATTGAAAGAGAACGTTCCTACCGTT
CCCGTTGAAAGTTTGAATATTTTAATTCTTTTACAAACAACAATGTGATGACGTGGGGGA
GATTTTACACCAGACATCATAAAAAAACAAAACTCCTTAGAGCTTCATGCTTTTTATGTT
TTGAATTTTAATGCGATACTTTTGAGTTCATATTTACCAGATATCAAAAGTTAAAGAAAA
AAACACTGACTTTATATTTAGAACAATACAAACTTATAAAACATCATATGTAAAATAAAT
TCTACCTGCCACACAATTAAAATTACTGAACAGGCAAAGAAAAAACAGAATCTGCTGTAT
TGTCAATACGTGATTGTACATTGTAACTGTAAACAATACAGTTGTTTTGTTTATAGTTGA
TTGGGGAGGAACTTTGCTGTGGCACATCTTTCGAATTCCGTTTGCAAATGTTTACATTAA
AGCGGGTTCAGTTAATTCGCACTTTTATAAAAACTAAACACAAAGTGGGAAACTAGATAA
TAGGAAATACCATTCGTGTTCCATATAATGTT

InterProScan

PANTHER
PRP38 (IPR005037) - T[9-77] 3.2E-111 - T[122-393] 3.2E-111
Pfam
PRP38 (IPR005037) - T[32-117] 2.7E-13 - T[122-259] 1.9E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PR38B_HUMAN 56.25 % 266 3.05E-84