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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Clone 'cien82698' > 
  3. Transcript 'KH2012:KH.L116.52.v1...' > 
  4. Transcript 'KH2012:KH.C9.10.v8.A...' > 
  5. Transcript 'KH2012:KH.C9.10.v5.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.10.v5.A.SL2-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,887]

Sequences

Amino acid sequence

Length: 273

>KH.C9.10.v5.A.SL2-1
HVGVDHLEPWERGTRKTAGQTGMCGGVRGVGAGGVVSTSFCILFKLFTLKLTRKQVNGLL
NHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCVMTIGMMVRTVLT
KLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNEDRGSRAASLKSK
SPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHDRKRRSRDKDSRR
RSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,548

>KH2012:KH.C9.10.v5.A.SL2-1
TTACAGTTTTACCACAATAGGTTTGATGTATAAATTTAAGAATTTAGGTTTTACTTTGTC
TGACGACTTACTTCACATTTTGGAAAAAACGGGACCAAGGATCAAGTATTTAGCAAATTT
AGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATTATCAGGATGGTGAAC
AGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACATGTTGGGGTTGACCAT
TTAGAGCCCTGGGAAAGAGGAACAAGGAAAACTGCCGGCCAAACTGGGATGTGTGGTGGA
GTAAGAGGTGTTGGAGCTGGTGGTGTCGTTTCCACTTCTTTCTGCATTTTGTTCAAACTT
TTCACTTTGAAACTCACACGCAAACAAGTAAATGGACTTCTCAACCACACTGACTCACCG
TATATAAGAGGCCTAGGAGTTATGTACATTAGATACACTCAAGCACCCAAGGATTTATGG
CATTGGTTGGAAGCTTACTTGGAAGATGAAGAGGAAATAGATGTGAAGGCAGGAGGGGGT
TGTGTGATGACCATAGGAATGATGGTAAGAACTGTACTCACTAAACTTGAATGGTTTTCA
ACTCTGTTCCCAAGAATACCTGTCCCAATACAAAAGCTCATTGATGAAAATTTAAGTGCG
TATGGATTGACTGGACTACGTAGAGGAAGAGATGAACCATCTGAAGATTATGAGCAATAC
AATGAAGACCGTGGCAGCAGAGCTGCTTCTTTAAAAAGCAAATCACCAGAGCACAGATCA
AGTAGAGACAGGAGCAGTCGACACCGATCCCCTGAAGTTCGTCGTAAAAGAAGTCGGTCC
CGCGGCCACAGTCGATCCCGTGATGACGGTCACCGTCGCCATGAGAAGGTTAGAAGTTCA
CATGATAGAAAGCGTAGATCACGTGATAAAGATTCACGGAGAAGAAGTTATGAGCGTTCA
TCTAGACATCGAAGCAGATCCCGTGAAAGGCATCGTAGAAGATCTCGAAGTATTGAAAGA
GAACGTTCCTACCGTTCCCGTTGAAAGTTTGAATATTTTAATTCTTTTACAAACAACAAT
GTGATGACGTGGGGGAGATTTTACACCAGACATCATAAAAAAACAAAACTCCTTAGAGCT
TCATGCTTTTTATGTTTTGAATTTTAATGCGATACTTTTGAGTTCATATTTACCAGATAT
CAAAAGTTAAAGAAAAAAACACTGACTTTATATTTAGAACAATACAAACTTATAAAACAT
CATATGTAAAATAAATTCTACCTGCCACACAATTAAAATTACTGAACAGGCAAAGAAAAA
ACAGAATCTGCTGTATTGTCAATACGTGATTGTACATTGTAACTGTAAACAATACAGTTG
TTTTGTTTATAGTTGATTGGGGAGGAACTTTGCTGTGGCACATCTTTCGAATTCCGTTTG
CAAATGTTTACATTAAAGCGGGTTCAGTTAATTCGCACTTTTATAAAAACTAAACACAAA
GTGGGAAACTAGATAATAGGAAATACCATTCGTGTTCCATATAATGTT

InterProScan

PANTHER
PRP38 (IPR005037) - T[4-273] 9.2E-87
Pfam
PRP38 (IPR005037) - T[4-139] 3.8E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PR38B_HUMAN 75.694 % 234 1.11E-73