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TRANSCRIPT CARD

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  1. Region 'REG00000786' > 
  2. Region 'REG00000015' > 
  3. Transcript 'KH2012:KH.C8.32.v1.A...' > 
  4. Transcript 'KH2012:KH.L35.3.v2.A...' > 
  5. Transcript 'KH2012:KH.C9.10.v6.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.10.v6.A.SL1-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,390]

Sequences

Amino acid sequence

Length: 345

>KH.C9.10.v6.A.SL1-1
DRMDEQYDEENYQDGEQESYEARPKLGNTLTCWGNPRTMNLNHLVLTNVQNSPYFKVRLF
ELKTYHEVVDEIYYKVDHLEPWERGTRKTAGQTGMCGGVRGVGAGGVVSTSFCILFKLFT
LKLTRKQVNGLLNHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCV
MTIGMMVRTVLTKLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNE
DRGSRAASLKSKSPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHD
RKRRSRDKDSRRRSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,568

>KH2012:KH.C9.10.v6.A.SL1-1
GTATTTAGCAAATTTAGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATT
ATCAGGATGGTGAACAGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACAT
GTTGGGGTAATCCTCGAACAATGAATTTGAATCATCTCGTACTTACAAATGTGCAGAATT
CCCCTTATTTTAAAGTTCGCCTTTTCGAACTGAAAACTTATCATGAGGTTGTTGATGAGA
TTTATTATAAGGTTGACCATTTAGAGCCCTGGGAAAGAGGAACAAGGAAAACTGCCGGCC
AAACTGGGATGTGTGGTGGAGTAAGAGGTGTTGGAGCTGGTGGTGTCGTTTCCACTTCTT
TCTGCATTTTGTTCAAACTTTTCACTTTGAAACTCACACGCAAACAAGTAAATGGACTTC
TCAACCACACTGACTCACCGTATATAAGAGGCCTAGGAGTTATGTACATTAGATACACTC
AAGCACCCAAGGATTTATGGCATTGGTTGGAAGCTTACTTGGAAGATGAAGAGGAAATAG
ATGTGAAGGCAGGAGGGGGTTGTGTGATGACCATAGGAATGATGGTAAGAACTGTACTCA
CTAAACTTGAATGGTTTTCAACTCTGTTCCCAAGAATACCTGTCCCAATACAAAAGCTCA
TTGATGAAAATTTAAGTGCGTATGGATTGACTGGACTACGTAGAGGAAGAGATGAACCAT
CTGAAGATTATGAGCAATACAATGAAGACCGTGGCAGCAGAGCTGCTTCTTTAAAAAGCA
AATCACCAGAGCACAGATCAAGTAGAGACAGGAGCAGTCGACACCGATCCCCTGAAGTTC
GTCGTAAAAGAAGTCGGTCCCGCGGCCACAGTCGATCCCGTGATGACGGTCACCGTCGCC
ATGAGAAGGTTAGAAGTTCACATGATAGAAAGCGTAGATCACGTGATAAAGATTCACGGA
GAAGAAGTTATGAGCGTTCATCTAGACATCGAAGCAGATCCCGTGAAAGGCATCGTAGAA
GATCTCGAAGTATTGAAAGAGAACGTTCCTACCGTTCCCGTTGAAAGTTTGAATATTTTA
ATTCTTTTACAAACAACAATGTGATGACGTGGGGGAGATTTTACACCAGACATCATAAAA
AAACAAAACTCCTTAGAGCTTCATGCTTTTTATGTTTTGAATTTTAATGCGATACTTTTG
AGTTCATATTTACCAGATATCAAAAGTTAAAGAAAAAAACACTGACTTTATATTTAGAAC
AATACAAACTTATAAAACATCATATGTAAAATAAATTCTACCTGCCACACAATTAAAATT
ACTGAACAGGCAAAGAAAAAACAGAATCTGCTGTATTGTCAATACGTGATTGTACATTGT
AACTGTAAACAATACAGTTGTTTTGTTTATAGTTGATTGGGGAGGAACTTTGCTGTGGCA
CATCTTTCGAATTCCGTTTGCAAATGTTTACATTAAAGCGGGTTCAGTTAATTCGCACTT
TTATAAAAACTAAACACAAAGTGGGAAACTAGATAATAGGAAATACCATTCGTGTTCCAT
ATAATGTT

InterProScan

PANTHER
PRP38 (IPR005037) - T[9-345] 9.2E-118
Pfam
PRP38 (IPR005037) - T[32-211] 2.0E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PR38B_HUMAN 75.521 % 315 4.43E-104