Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.10.v7.A.SL2-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,887]

Sequences

Amino acid sequence

Length: 284

>KH.C9.10.v7.A.SL2-1
ISVMLTEIVQKNLVTSCCQNCIYQKLIIYIYKFILNQVRGVGAGGVVSTSFCILFKLFTL
KLTRKQVNGLLNHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCVM
TIGMMVRTVLTKLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNED
RGSRAASLKSKSPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHDR
KRRSRDKDSRRRSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,751

>KH2012:KH.C9.10.v7.A.SL2-1
TTACAGTTTTACCACAATAGGTTTGATGTATAAATTTAAGAATTTAGGTTTTACTTTGTC
TGACGACTTACTTCACATTTTGGAAAAAACGGGACCAAGGATCAAGTATTTAGCAAATTT
AGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATTATCAGGATGGTGAAC
AGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACATGTTGGGGTTGACCAT
TTAGAGCCCTGGGAAAGAGGAACAAGGAAAACTGCCGGCCAAACTGGGATGTGTGGTGGA
GTATGTTTATTTGTTTTTATTTTGTATTATTATCCTAATTTTAATTTATTTTTCGCATAC
ATTTTGGTCTGTACAAACTACAAACTAATTGAATCAGTGTAATGCTTACAGAAATTGTCC
AAAAAAATCTTGTCACCTCGTGTTGTCAAAATTGTATTTACCAAAAATTAATTATATATA
TATATAAATTTATTCTCAACCAGGTAAGAGGTGTTGGAGCTGGTGGTGTCGTTTCCACTT
CTTTCTGCATTTTGTTCAAACTTTTCACTTTGAAACTCACACGCAAACAAGTAAATGGAC
TTCTCAACCACACTGACTCACCGTATATAAGAGGCCTAGGAGTTATGTACATTAGATACA
CTCAAGCACCCAAGGATTTATGGCATTGGTTGGAAGCTTACTTGGAAGATGAAGAGGAAA
TAGATGTGAAGGCAGGAGGGGGTTGTGTGATGACCATAGGAATGATGGTAAGAACTGTAC
TCACTAAACTTGAATGGTTTTCAACTCTGTTCCCAAGAATACCTGTCCCAATACAAAAGC
TCATTGATGAAAATTTAAGTGCGTATGGATTGACTGGACTACGTAGAGGAAGAGATGAAC
CATCTGAAGATTATGAGCAATACAATGAAGACCGTGGCAGCAGAGCTGCTTCTTTAAAAA
GCAAATCACCAGAGCACAGATCAAGTAGAGACAGGAGCAGTCGACACCGATCCCCTGAAG
TTCGTCGTAAAAGAAGTCGGTCCCGCGGCCACAGTCGATCCCGTGATGACGGTCACCGTC
GCCATGAGAAGGTTAGAAGTTCACATGATAGAAAGCGTAGATCACGTGATAAAGATTCAC
GGAGAAGAAGTTATGAGCGTTCATCTAGACATCGAAGCAGATCCCGTGAAAGGCATCGTA
GAAGATCTCGAAGTATTGAAAGAGAACGTTCCTACCGTTCCCGTTGAAAGTTTGAATATT
TTAATTCTTTTACAAACAACAATGTGATGACGTGGGGGAGATTTTACACCAGACATCATA
AAAAAACAAAACTCCTTAGAGCTTCATGCTTTTTATGTTTTGAATTTTAATGCGATACTT
TTGAGTTCATATTTACCAGATATCAAAAGTTAAAGAAAAAAACACTGACTTTATATTTAG
AACAATACAAACTTATAAAACATCATATGTAAAATAAATTCTACCTGCCACACAATTAAA
ATTACTGAACAGGCAAAGAAAAAACAGAATCTGCTGTATTGTCAATACGTGATTGTACAT
TGTAACTGTAAACAATACAGTTGTTTTGTTTATAGTTGATTGGGGAGGAACTTTGCTGTG
GCACATCTTTCGAATTCCGTTTGCAAATGTTTACATTAAAGCGGGTTCAGTTAATTCGCA
CTTTTATAAAAACTAAACACAAAGTGGGAAACTAGATAATAGGAAATACCATTCGTGTTC
CATATAATGTT

InterProScan

Pfam	PRP38 (IPR005037) - T[19-150] 2.0E-35
PANTHER	PRP38 (IPR005037) - T[40-284] 7.4E-79

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PR38B_HUMAN	75.926 %	197	3.01E-59