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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.532.v1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Clone 'cien82698' > 
  4. Transcript 'KH2012:KH.L116.52.v1...' > 
  5. Transcript 'KH2012:KH.C9.10.v8.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.10.v8.A.SL2-1

Possible name(s)

PRPF38A; PRPF38B

Gene model

KH2012:KH.C9.10

Location

KhC9 [4,984,710 / 4,988,887]

Sequences

Amino acid sequence

Length: 393

>KH.C9.10.v8.A.SL2-1
DRMDEQYDEENYQDGEQESYEARPKLGNTLTCWGNPRTMNLNHLVLTNVQNSPYFKVRLF
ELKTYHEVVDEIYYKVRQGNMKSGPGSAHPWVTAASIYSFLIKNLQLKFNNNIIRKLTFS
LKQVDHLEPWERGTRKTAGQTGMCGGVRGVGAGGVVSTSFCILFKLFTLKLTRKQVNGLL
NHTDSPYIRGLGVMYIRYTQAPKDLWHWLEAYLEDEEEIDVKAGGGCVMTIGMMVRTVLT
KLEWFSTLFPRIPVPIQKLIDENLSAYGLTGLRRGRDEPSEDYEQYNEDRGSRAASLKSK
SPEHRSSRDRSSRHRSPEVRRKRSRSRGHSRSRDDGHRRHEKVRSSHDRKRRSRDKDSRR
RSYERSSRHRSRSRERHRRRSRSIERERSYRSR

Nucleotide sequence

Length: 1,817

>KH2012:KH.C9.10.v8.A.SL2-1
TTACAGTTTTACCACAATAGGTTTGATGTATAAATTTAAGAATTTAGGTTTTACTTTGTC
TGACGACTTACTTCACATTTTGGAAAAAACGGGACCAAGGATCAAGTATTTAGCAAATTT
AGCATAAGTGAGATAGAATGGATGAACAGTACGATGAAGAGAATTATCAGGATGGTGAAC
AGGAGAGTTACGAAGCAAGACCCAAGCTCGGCAATACGTTAACATGTTGGGGTAATCCTC
GAACAATGAATTTGAATCATCTCGTACTTACAAATGTGCAGAATTCCCCTTATTTTAAAG
TTCGCCTTTTCGAACTGAAAACTTATCATGAGGTTGTTGATGAGATTTATTATAAGGTGC
GTCAAGGAAATATGAAGTCGGGTCCTGGCAGTGCTCATCCATGGGTTACTGCTGCATCGA
TATATTCATTTTTAATAAAAAATTTACAACTAAAGTTTAACAACAATATCATAAGAAAAT
TAACATTCTCCCTGAAACAGGTTGACCATTTAGAGCCCTGGGAAAGAGGAACAAGGAAAA
CTGCCGGCCAAACTGGGATGTGTGGTGGAGTAAGAGGTGTTGGAGCTGGTGGTGTCGTTT
CCACTTCTTTCTGCATTTTGTTCAAACTTTTCACTTTGAAACTCACACGCAAACAAGTAA
ATGGACTTCTCAACCACACTGACTCACCGTATATAAGAGGCCTAGGAGTTATGTACATTA
GATACACTCAAGCACCCAAGGATTTATGGCATTGGTTGGAAGCTTACTTGGAAGATGAAG
AGGAAATAGATGTGAAGGCAGGAGGGGGTTGTGTGATGACCATAGGAATGATGGTAAGAA
CTGTACTCACTAAACTTGAATGGTTTTCAACTCTGTTCCCAAGAATACCTGTCCCAATAC
AAAAGCTCATTGATGAAAATTTAAGTGCGTATGGATTGACTGGACTACGTAGAGGAAGAG
ATGAACCATCTGAAGATTATGAGCAATACAATGAAGACCGTGGCAGCAGAGCTGCTTCTT
TAAAAAGCAAATCACCAGAGCACAGATCAAGTAGAGACAGGAGCAGTCGACACCGATCCC
CTGAAGTTCGTCGTAAAAGAAGTCGGTCCCGCGGCCACAGTCGATCCCGTGATGACGGTC
ACCGTCGCCATGAGAAGGTTAGAAGTTCACATGATAGAAAGCGTAGATCACGTGATAAAG
ATTCACGGAGAAGAAGTTATGAGCGTTCATCTAGACATCGAAGCAGATCCCGTGAAAGGC
ATCGTAGAAGATCTCGAAGTATTGAAAGAGAACGTTCCTACCGTTCCCGTTGAAAGTTTG
AATATTTTAATTCTTTTACAAACAACAATGTGATGACGTGGGGGAGATTTTACACCAGAC
ATCATAAAAAAACAAAACTCCTTAGAGCTTCATGCTTTTTATGTTTTGAATTTTAATGCG
ATACTTTTGAGTTCATATTTACCAGATATCAAAAGTTAAAGAAAAAAACACTGACTTTAT
ATTTAGAACAATACAAACTTATAAAACATCATATGTAAAATAAATTCTACCTGCCACACA
ATTAAAATTACTGAACAGGCAAAGAAAAAACAGAATCTGCTGTATTGTCAATACGTGATT
GTACATTGTAACTGTAAACAATACAGTTGTTTTGTTTATAGTTGATTGGGGAGGAACTTT
GCTGTGGCACATCTTTCGAATTCCGTTTGCAAATGTTTACATTAAAGCGGGTTCAGTTAA
TTCGCACTTTTATAAAAACTAAACACAAAGTGGGAAACTAGATAATAGGAAATACCATTC
GTGTTCCATATAATGTT

InterProScan

PANTHER
PRP38 (IPR005037) - T[9-77] 3.2E-111 - T[122-393] 3.2E-111
Pfam
PRP38 (IPR005037) - T[32-117] 2.7E-13 - T[122-259] 1.9E-36

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PR38B_HUMAN 56.25 % 266 3.05E-84