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  1. Transcript 'KH2012:KH.C9.104.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.104.v1.A.SL2-1

Possible name(s)

FIBCD1; TNR; TNXB

Location

KhC9 [3,026,261 / 3,029,376]

Sequences

Amino acid sequence

Length: 244

>KH.C9.104.v1.A.SL2-1
RYSVLVELERTEQKSGWDEISITVDWESKTYNWPLDNCKQLFMVGNINNGIYEINENGNI
IEVYCDMTTDGGGWTVFQRRINGKQDFDLTWDEYRRGFGNKSAEFWMGLDKLHSLTRQGS
YELRIELKDCQNKTLYAKYGTFKVMNLSENFRLQIAEFSACPGFDDSLSYHNGMLFSTKD
RDNDLLHSQSCSSVYHSGWWYKTCHRANLNGQYRPCVVTADAMTWHNNSIAVGLRFTEMK
FRPL

Nucleotide sequence

Length: 1,506

>KH2012:KH.C9.104.v1.A.SL2-1
AGATACATATTTAATAGGAAAACTGTGCACAGCTATCGGAAACTTTACATTCGACTCCGT
TACGTCCAATATAGTAGGTCGACGTTTAATTACACAAATTAAGATGAGATCTATTTTGCT
AACAATAGTTTTAATGCTGGTTACACCAACGCTCCAGCTAATTCAGTTCAACCGAGGAAG
CCTCCAGAAAATGTACTTCTCCAAAAATTCAAAGAAGAAAATGAACGTTCCGTACAAGAT
CTGTTTAGATGCAACTCCTGTTTATGTCAACGCCACAGCTCGTCCAACTAATGCATCACT
CCCGCATACCTTCAACCTCACTGTTATAGATATATAGCGGTACAGTGTATTGGTTGAACT
GGAACGCACAGAACAGAAATCGGGATGGGATGAAATATCAATCACTGTCGATTGGGAATC
TAAGACATACAATTGGCCATTGGACAACTGCAAACAACTTTTTATGGTTGGGAACATTAA
CAATGGAATCTACGAAATAAATGAGAATGGGAATATAATTGAAGTTTACTGCGATATGAC
AACTGACGGTGGTGGATGGACGGTTTTCCAGCGACGAATAAACGGTAAACAAGATTTCGA
CCTTACATGGGACGAATACAGGCGGGGATTCGGCAATAAGAGTGCAGAATTTTGGATGGG
ATTGGACAAATTACATTCGCTTACAAGACAGGGTTCGTATGAGTTAAGGATTGAACTGAA
GGATTGTCAAAATAAGACCTTGTACGCGAAGTATGGGACATTTAAAGTAATGAACCTATC
CGAGAATTTTCGATTGCAGATTGCAGAGTTTAGTGCATGTCCAGGGTTCGATGATTCCCT
ATCATATCACAACGGCATGCTTTTCTCGACTAAGGATCGTGATAATGACTTGCTGCATAG
TCAAAGTTGCTCGAGCGTGTACCATAGTGGTTGGTGGTACAAGACTTGCCACCGGGCCAA
CCTTAACGGTCAATATCGCCCATGTGTTGTTACTGCTGACGCAATGACATGGCACAATAA
CTCTATCGCCGTTGGACTTCGATTCACTGAAATGAAATTCCGTCCACTTTAAAAGAGAAA
CAATATTAGGTGTTTGCACAACCCACCTTATATATACATTACATAGGTGAGCACCTAAAA
TCCATATTTTCGTATCGTGGTTTTAACAATTACCTATGCCCTTTCGAGTCGGTCTACGGA
TACATAATTCTGTAGATATTCTTTGTTGTTTACTACCAAATGGGACGCTAAAAGAGAATA
AAAACATGTCCCATCTTACCCCACCTTACCATAAACCGCAATTATTCTGTACTTTGTGTA
AAAATGTGATGTATTAAATACCGTATAATAATGTACATGTAAAAATCAAATTTTTAATGC
TATCTATACTCCTTTTGTTTTTAAGTTCATAACTATACCTAACACGTTTTAACCCATAGC
ACTGAAATAAGGTAATTGGCCCGATTGTAACCTAACACCACAATCCACATATATAGTCTA
CCTGCA

InterProScan

SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[29-243] 7.33E-72
ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[29-244] 49.384
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[33-244] 2.0E-77
CDD
Fibrinogen_a/b/g_C_dom (IPR002181) - T[36-244] 1.38018E-88
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[37-243] 9.0E-65
ProSitePatterns
Fibrinogen_CS (IPR020837) - T[199-211] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TENR_HUMAN 42.683 % 191 1.26E-55
TENX_HUMAN 45.026 % 179 2.61E-51
FBCD1_HUMAN 43.379 % 180 4.51E-54





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