- Transcript 'KH2012:KH.C9.104.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.104.v1.R.ND1-1
Possible name(s)
FIBCD1; TNR; TNXB
Gene model
Location
KhC9 [3,026,261 / 3,029,369]
Amino acid sequence
Length: 244
>KH.C9.104.v1.R.ND1-1
RYSVLVELERTEQKSGWDEISITVDWESKTYNWPLDNCKQLFMVGNINNGIYEINENGNI
IEVYCDMTTDGGGWTVFQRRINGKQDFDLTWDEYRRGFGNKSAEFWMGLDKLHSLTRQGS
YELRIELKDCQNKTLYAKYGTFKVMNLSENFRLQIAEFSACPGFDDSLSYHNGMLFSTKD
RDNDLLHSQSCSSVYHSGWWYKTCHRANLNGQYRPCVVTADAMTWHNNSIAVGLRFTEMK
FRPL
Nucleotide sequence
Length: 1,499
>KH2012:KH.C9.104.v1.R.ND1-1
TATTTAATAGGAAAACTGTGCACAGCTATCGGAAACTTTACATTCGACTCCGTTACGTCC
AATATAGTAGGTCGACGTTTAATTACACAAATTAAGATGAGATCTATTTTGCTAACAATA
GTTTTAATGCTGGTTACACCAACGCTCCAGCTAATTCAGTTCAACCGAGGAAGCCTCCAG
AAAATGTACTTCTCCAAAAATTCAAAGAAGAAAATGAACGTTCCGTACAAGATCTGTTTA
GATGCAACTCCTGTTTATGTCAACGCCACAGCTCGTCCAACTAATGCATCACTCCCGCAT
ACCTTCAACCTCACTGTTATAGATATATAGCGGTACAGTGTATTGGTTGAACTGGAACGC
ACAGAACAGAAATCGGGATGGGATGAAATATCAATCACTGTCGATTGGGAATCTAAGACA
TACAATTGGCCATTGGACAACTGCAAACAACTTTTTATGGTTGGGAACATTAACAATGGA
ATCTACGAAATAAATGAGAATGGGAATATAATTGAAGTTTACTGCGATATGACAACTGAC
GGTGGTGGATGGACGGTTTTCCAGCGACGAATAAACGGTAAACAAGATTTCGACCTTACA
TGGGACGAATACAGGCGGGGATTCGGCAATAAGAGTGCAGAATTTTGGATGGGATTGGAC
AAATTACATTCGCTTACAAGACAGGGTTCGTATGAGTTAAGGATTGAACTGAAGGATTGT
CAAAATAAGACCTTGTACGCGAAGTATGGGACATTTAAAGTAATGAACCTATCCGAGAAT
TTTCGATTGCAGATTGCAGAGTTTAGTGCATGTCCAGGGTTCGATGATTCCCTATCATAT
CACAACGGCATGCTTTTCTCGACTAAGGATCGTGATAATGACTTGCTGCATAGTCAAAGT
TGCTCGAGCGTGTACCATAGTGGTTGGTGGTACAAGACTTGCCACCGGGCCAACCTTAAC
GGTCAATATCGCCCATGTGTTGTTACTGCTGACGCAATGACATGGCACAATAACTCTATC
GCCGTTGGACTTCGATTCACTGAAATGAAATTCCGTCCACTTTAAAAGAGAAACAATATT
AGGTGTTTGCACAACCCACCTTATATATACATTACATAGGTGAGCACCTAAAATCCATAT
TTTCGTATCGTGGTTTTAACAATTACCTATGCCCTTTCGAGTCGGTCTACGGATACATAA
TTCTGTAGATATTCTTTGTTGTTTACTACCAAATGGGACGCTAAAAGAGAATAAAAACAT
GTCCCATCTTACCCCACCTTACCATAAACCGCAATTATTCTGTACTTTGTGTAAAAATGT
GATGTATTAAATACCGTATAATAATGTACATGTAAAAATCAAATTTTTAATGCTATCTAT
ACTCCTTTTGTTTTTAAGTTCATAACTATACCTAACACGTTTTAACCCATAGCACTGAAA
TAAGGTAATTGGCCCGATTGTAACCTAACACCACAATCCACATATATAGTCTACCTGCA
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[29-243] 7.33E-72 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[29-244] 49.384 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[33-244] 2.0E-77 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[36-244] 1.38018E-88 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[37-243] 9.0E-65 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[199-211] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TENR_HUMAN | 42.683 % | 191 | 1.26E-55 |
| TENX_HUMAN | 45.026 % | 179 | 2.61E-51 |
| FBCD1_HUMAN | 43.379 % | 180 | 4.51E-54 |