- Transcript 'KH2012:KH.C9.131.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.131.v1.A.SL1-1
Possible name(s)
TNC; TNN; TNR
Gene model
Location
KhC9 [4,719,772 / 4,739,887]
Amino acid sequence
Length: 1,963
>KH.C9.131.v1.A.SL1-1
LSVRGHKMWPVSSRTTCSKGFCIYIFLLLFILFPSTTIGLRREIRNVTQVGNIGEEEVVF
NHIYTINVPDQQQLKLHKCRRRCVDSPAIDIIDRVSDTERATTMRPLSFDSCPRRCSGNG
KCISGLCQCDRGYQGDDCSESICVNACSGHGACNKHGRCQCWGQWSGEDCSLRSCPNDCS
GNGICDNGLCVCDVSYSGADCSRRSCLNDCNGHGRCNEDTGQCRCHGSWEGPECSAQRCL
RDCSGNGDCLNGRCQCDEPWTGKACRILKCPNQCSSNGKCRNGTCVCRNEWTGDDCSSPK
CPDDCSGLGECRSGVCECTAGWGGLNCSQPMCVNDCSNNGQCIDGRCRCWGGWEGNSCSH
VIKPSGLEISNIQPTTIDVSWSKTSPAITGSQVNCIPMEGTANAVYQSVGPNVTKLTIRD
LDSGTQYSVYVYAMIDESLSAPITASVKTGVDTPSQLSYIRIGATFAEITWKPPKAKIDK
YKMVCSCKQGGAEFVVQSNKTSVLIKDLSPGETYSVALYAVQGENVSTPININFTTSLDA
PKSVEFIDVTSTSATAWWVPSVAKITGYKFALVQFDGQNIVEDQVTSTSRMFTFTNLKPR
TRYNFTIHSIRGEEHSVPLHANLITGIDAPTNLRIASTTPTSVSVTWSKPHADVEGYSVE
CLDVRRGARQEIKLSGDEWSATFTSLRPATEYNITIQAELDDISSTKVWRLTYTTLPQPQ
NIRVSSPTFDDLVVIWDPVIVFQQRRIMDLYSTSDVHSLTIPANQTYVSITNLIDDTSYV
INVTSVMYDRESVSSTIMFTTEMMIIEPPEYLHTTEIKHKSIGLEWMESLSENIDGYFVA
YMPLHMHGQHENTTLVGDKTSTVLQGLTPGTEYLINVFTVYNERVSIPVQLSVTTAIDPP
TRLMFVTVSDSSFTIHWQQPIAMVANYIVTYYRSSSTGERQDIIIPGGETVCSIHNLVPA
TEYTVEIYAMGNSTQSDPTMAMVVTLIPPVHGVAVLPIDEKTIHVQWKSPPNVKVEGYTV
SYKPLDEFSQTMDQVVKGDETSAVITGLLADTQYAVTVHANVGDLVAKKRQIKATTASSL
ESPETLRITNIRDTSAHVRWDPVIDKTVTGYLLRYKPVGGSTEDEVKVGLKGRKKVGHML
MKLRPGVLYYVSVATERHERVSFPPVTERFVTSQMLTAPVDVVVRNITESSVSLEWPSQY
VDGIEEYHMTYSVLGGGETNEIITASPETMIATIEGLLPGRSYTINIRSFRWGVDSADAT
SITITTLHPLLPPRDLILDGRNQTEARIRWTPTTPDADAHHITLSSLRGGGSPFSVRLSP
TSGMANFKDLKPGTRYRVTLVTMRGNQSSDSRVLKFRTDERLDSPSNITVSLMGENGANI
TWKISQQKYDRIYFSYSSDDETESNSTFLNRKMTHIILTHLTPDTLYHATIACKYKRKTS
PLKMFSFTTDYIIPSPTRIQFTAVNKTRLTVRWRKASNRAQYYRIAYKDEHRMQRTVTIS
GRSTRLPLEYLQAGTSYNVSVTALGRNKESLPLVGKVTTLLNPPSKLNATSTTSASVQLT
WEPPLSPVDGFVIKYHELVSRKISRRPSVIVKSNLKVIHVKNNTTVNVTGLVAGTKYVFQ
VVARKDGREAYSMRVVQQTDIAPPRNLRTSVTSRRSANLTWDFANMTQVTGYLVNVTAVN
STFNRAYNVKPQTSYVFLQNLLPGVEYNVDVTTLCKLDKSRPVQVHFKTAKVPYPKPKDC
VQVLRNGETLNKVYEIYPYNGITLKVFCDLHTDGGGWLTFQRRQDGSLSFHRSWDEYMSG
FGNLTKEFWIGLQTLHELTMTNDQTLRIDMRYKDEVSYAVYRNFSLSDAATGFMLHASGY
TGTAGDSLSYHDGMKFTTYDRDNDDATNRNCAKEYKGAWWFKNCHRSSLNGLYGNSRHSQ
GVNWYSWGGFTRSIEFVEMKLRPQSFIQPTVKPAIMRRFEAIR
Nucleotide sequence
Length: 5,969
>KH2012:KH.C9.131.v1.A.SL1-1
GTTAAGTGTTAGAGGCCATAAAATGTGGCCTGTTTCGAGTCGTACGACTTGTTCTAAAGG
ATTCTGTATTTATATTTTCTTACTGCTGTTCATTTTATTCCCGTCCACGACGATTGGGTT
ACGCAGGGAAATACGCAACGTAACCCAAGTAGGAAATATCGGTGAAGAAGAAGTTGTTTT
TAACCACATATACACTATTAACGTTCCTGACCAGCAGCAATTAAAACTCCACAAGTGCCG
ACGTAGGTGCGTCGACTCTCCTGCTATTGATATTATTGATCGTGTGAGTGATACCGAAAG
AGCGACGACCATGAGGCCGCTAAGTTTTGATAGCTGCCCACGAAGATGTTCAGGTAATGG
CAAATGTATTTCTGGTTTATGTCAATGCGACAGAGGTTACCAAGGAGACGATTGCTCCGA
ATCTATTTGCGTCAACGCTTGTTCAGGACACGGTGCATGCAACAAGCACGGAAGGTGCCA
GTGCTGGGGTCAATGGAGTGGGGAAGATTGTTCACTAAGAAGTTGTCCAAATGACTGCAG
TGGGAATGGTATCTGCGATAACGGGCTTTGCGTTTGCGACGTTTCTTATTCAGGTGCTGA
TTGTAGCAGAAGAAGTTGCCTCAATGATTGCAATGGACATGGTAGATGCAATGAGGACAC
TGGCCAATGTAGATGTCATGGGAGTTGGGAGGGACCCGAGTGTTCAGCACAAAGATGTTT
GAGGGATTGCTCTGGGAATGGGGATTGTCTGAATGGAAGGTGTCAGTGTGATGAGCCATG
GACAGGCAAAGCATGTCGTATCTTAAAATGCCCCAACCAATGTTCATCGAACGGTAAATG
TCGCAACGGAACTTGCGTTTGTCGCAACGAGTGGACGGGTGATGACTGTAGCTCCCCTAA
GTGTCCAGATGATTGTTCTGGCTTAGGTGAATGCAGGAGTGGTGTTTGTGAATGTACAGC
TGGGTGGGGTGGGTTAAACTGCTCACAACCAATGTGTGTGAACGATTGCTCCAACAATGG
ACAATGTATAGATGGTAGATGCAGATGCTGGGGTGGTTGGGAGGGCAATAGTTGTTCTCA
TGTCATCAAACCATCAGGACTTGAGATATCAAACATCCAACCAACCACTATTGATGTTAG
TTGGAGTAAAACATCACCAGCTATAACTGGAAGCCAGGTTAACTGCATTCCTATGGAGGG
AACAGCAAATGCAGTTTACCAATCTGTGGGTCCCAATGTGACTAAACTAACAATAAGAGA
CCTTGACAGTGGGACCCAATATTCTGTATATGTTTATGCAATGATAGATGAATCATTAAG
TGCTCCAATTACTGCTTCTGTGAAAACAGGAGTTGACACACCATCTCAATTAAGCTACAT
AAGAATCGGTGCAACATTCGCTGAGATAACATGGAAGCCACCAAAGGCAAAGATTGATAA
ATATAAGATGGTGTGCAGTTGTAAGCAGGGGGGTGCTGAATTTGTTGTTCAATCAAACAA
GACGTCGGTTCTTATAAAGGATCTGTCACCAGGGGAAACCTATTCAGTTGCATTATACGC
TGTGCAGGGGGAAAACGTTAGCACGCCTATTAATATCAACTTCACTACATCACTAGACGC
TCCAAAATCTGTTGAATTTATTGATGTAACTTCCACATCTGCTACTGCATGGTGGGTGCC
AAGTGTTGCTAAAATAACTGGATATAAATTTGCACTTGTTCAATTTGATGGACAAAACAT
AGTGGAAGACCAGGTTACTTCAACCAGTCGTATGTTTACCTTCACAAACTTAAAGCCACG
AACAAGATACAACTTTACCATACACTCGATACGTGGTGAAGAACATAGTGTTCCATTACA
TGCTAACTTAATCACAGGTATTGATGCACCCACCAACTTACGGATAGCATCCACAACACC
AACCAGTGTGAGTGTAACATGGAGTAAACCACACGCTGATGTTGAAGGTTACAGTGTGGA
GTGCTTGGATGTTAGAAGGGGTGCGAGGCAAGAGATCAAATTATCTGGAGATGAATGGTC
AGCTACCTTTACCTCACTGAGGCCAGCCACTGAATATAATATAACAATACAAGCAGAGTT
AGATGATATTAGTAGCACTAAGGTATGGAGGCTTACCTACACAACATTGCCACAACCACA
AAACATACGGGTGTCTTCCCCTACCTTTGATGATTTGGTTGTTATATGGGATCCTGTGAT
TGTGTTTCAACAAAGAAGGATAATGGACTTATACAGCACATCTGATGTCCATTCACTTAC
CATACCTGCCAATCAAACCTATGTTTCCATCACCAACCTCATAGATGATACATCATATGT
GATTAACGTCACATCCGTGATGTATGATCGTGAAAGCGTTTCATCTACTATCATGTTCAC
GACGGAAATGATGATAATCGAACCACCTGAATACCTTCATACAACTGAGATCAAACACAA
GAGTATTGGGTTAGAATGGATGGAGTCGTTATCCGAGAATATAGATGGTTACTTTGTCGC
ATACATGCCACTACATATGCATGGGCAGCATGAGAATACAACACTGGTTGGGGACAAGAC
AAGCACTGTACTGCAGGGACTTACACCTGGAACTGAATATTTAATCAATGTATTCACAGT
ATATAATGAAAGAGTTAGTATTCCTGTTCAACTGTCCGTCACAACCGCCATTGACCCACC
CACAAGGTTAATGTTCGTCACTGTATCGGATTCTTCATTCACAATCCACTGGCAGCAACC
AATAGCCATGGTTGCCAATTATATTGTGACTTACTACAGATCAAGCTCTACAGGAGAGAG
GCAAGACATCATTATACCTGGAGGTGAGACAGTATGTTCAATACATAACCTTGTACCAGC
TACTGAATATACTGTGGAGATATACGCGATGGGTAATTCTACACAGAGTGATCCTACCAT
GGCTATGGTTGTAACACTAATACCCCCTGTGCATGGAGTGGCGGTTCTACCGATAGATGA
AAAGACGATTCATGTTCAATGGAAATCACCACCTAATGTTAAAGTGGAAGGTTACACTGT
TTCATATAAGCCTTTAGATGAGTTCAGTCAAACAATGGACCAAGTGGTTAAAGGAGATGA
AACTTCTGCTGTTATAACTGGGTTGCTTGCGGATACACAGTATGCTGTGACTGTACATGC
TAACGTGGGTGATCTGGTAGCTAAGAAAAGGCAAATAAAAGCAACCACAGCCTCCTCTCT
TGAATCCCCTGAAACATTGCGCATCACTAACATTCGTGATACATCGGCTCACGTGAGATG
GGATCCTGTGATTGATAAAACTGTCACAGGATATTTACTCAGATACAAACCAGTGGGTGG
CAGCACAGAGGATGAAGTTAAAGTTGGTTTAAAGGGAAGGAAAAAAGTTGGACATATGTT
GATGAAGTTACGACCTGGTGTTTTGTACTATGTATCTGTGGCCACTGAGCGGCATGAGAG
AGTCAGTTTTCCTCCCGTCACAGAACGCTTTGTGACATCACAGATGTTGACGGCACCAGT
TGATGTTGTGGTTCGTAATATCACGGAGTCTTCTGTTAGTTTAGAATGGCCAAGTCAATA
TGTTGATGGTATTGAAGAATACCATATGACATATTCAGTACTTGGGGGTGGAGAAACTAA
TGAGATAATAACAGCATCACCTGAAACTATGATTGCCACCATTGAAGGTTTGCTCCCTGG
ACGCAGCTACACCATCAATATCCGCTCCTTTAGATGGGGGGTAGATAGTGCTGATGCAAC
CTCGATTACCATAACCACCCTCCATCCACTCCTGCCTCCTAGGGATCTCATCCTGGATGG
AAGGAACCAAACAGAGGCAAGGATAAGATGGACACCGACCACACCTGATGCAGATGCTCA
TCATATAACTTTATCAAGTTTGAGGGGTGGGGGTTCGCCATTCAGTGTGAGGCTCTCCCC
AACCTCTGGTATGGCAAACTTCAAAGACCTCAAACCAGGTACAAGATACCGGGTTACCTT
AGTTACAATGCGTGGAAATCAAAGCAGTGATTCAAGGGTGCTGAAGTTTAGAACAGATGA
GAGATTAGATTCACCATCCAACATCACTGTATCTCTCATGGGTGAAAATGGAGCAAACAT
TACATGGAAAATATCGCAACAAAAATATGATCGTATTTATTTCTCCTATTCAAGTGATGA
TGAGACAGAATCGAATTCCACATTCCTTAATAGAAAGATGACCCACATAATATTAACCCA
TCTTACCCCAGATACTTTGTACCACGCTACTATTGCTTGTAAATATAAACGAAAGACAAG
TCCGCTGAAAATGTTTAGTTTCACCACTGATTACATCATACCCTCCCCCACTAGAATACA
ATTCACTGCAGTAAACAAGACGCGTTTAACTGTACGTTGGCGTAAAGCTTCTAACCGTGC
ACAGTATTATCGTATCGCTTATAAAGATGAACACAGAATGCAACGCACCGTCACAATATC
TGGTCGATCAACCAGGTTACCCCTTGAATACTTGCAAGCTGGCACCTCATATAATGTTAG
TGTTACTGCACTTGGAAGAAATAAGGAGAGTTTACCTTTGGTGGGGAAAGTTACAACATT
ATTGAACCCACCCAGCAAGTTAAATGCGACCTCCACTACAAGCGCAAGTGTTCAGTTAAC
ATGGGAACCTCCATTAAGTCCTGTAGATGGTTTCGTGATCAAGTATCATGAGCTTGTATC
ACGAAAAATATCACGAAGGCCAAGCGTGATTGTGAAAAGTAACTTGAAAGTTATTCATGT
GAAAAACAACACAACAGTGAATGTAACAGGTTTGGTTGCTGGGACAAAGTATGTGTTCCA
AGTTGTAGCAAGGAAAGATGGGAGGGAAGCTTACTCCATGCGTGTGGTGCAACAAACTGA
CATTGCACCTCCACGCAACTTACGAACATCCGTAACAAGCAGAAGGTCGGCAAACCTCAC
ATGGGACTTCGCTAACATGACACAAGTTACCGGGTACCTGGTTAATGTGACTGCTGTTAA
TAGTACTTTCAATCGTGCATATAATGTCAAACCACAAACATCTTATGTTTTCCTTCAAAA
CTTGTTACCTGGTGTTGAATACAACGTGGACGTTACAACATTGTGTAAACTTGATAAAAG
TCGTCCAGTGCAAGTACATTTTAAAACAGCAAAAGTACCTTACCCCAAGCCGAAGGATTG
TGTTCAAGTTTTAAGGAATGGAGAAACATTGAACAAAGTTTATGAAATATATCCTTATAA
TGGAATAACACTCAAGGTATTCTGTGACCTCCACACTGATGGGGGAGGTTGGCTCACCTT
CCAACGTAGACAAGATGGCTCACTAAGCTTCCATCGGTCGTGGGACGAATATATGAGTGG
GTTCGGTAACCTTACCAAGGAGTTTTGGATCGGTTTACAAACCCTTCATGAGTTAACAAT
GACCAACGATCAAACATTGAGGATAGACATGCGATATAAAGATGAAGTTTCATACGCTGT
GTATCGTAACTTCTCATTGTCTGATGCTGCTACTGGTTTCATGCTGCATGCAAGTGGTTA
TACAGGCACTGCAGGAGATTCGTTATCATATCATGACGGAATGAAATTCACGACATATGA
TCGTGATAATGATGATGCTACTAATAGGAATTGTGCAAAAGAATATAAAGGGGCTTGGTG
GTTTAAGAATTGCCACAGATCAAGTTTGAATGGATTGTATGGGAACTCAAGGCATAGTCA
GGGAGTTAACTGGTATAGTTGGGGAGGTTTCACGCGGTCCATCGAATTTGTGGAGATGAA
GCTTCGACCACAGTCGTTCATTCAACCAACTGTTAAACCAGCGATCATGAGAAGGTTCGA
AGCAATCCGATGACAAAACACCGCCTAGACGGAAACTTTGTTGCGGGTATAAGAATTAGA
AACCACTGTTTTACAATAATTTGCGCTTT
| SMART |
EGF-like_dom (IPR000742) - T[111-139] 3.8 - T[174-202] 55.0 - T[205-235] 40.0 - T[238-266] 16.0 - T[269-297] 21.0 - T[300-328] 35.0 - T[331-359] 10.0 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[139-171] 8.684 - T[202-235] 11.455 - T[266-297] 7.097 - T[328-359] 7.905 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[159-170] . - T[223-234] . - T[285-296] . - T[347-358] . - T[347-358] . |
| Pfam |
EGF_extracell (IPR013111) - T[175-201] 6.7E-5 |
| PANTHER |
TNR (IPR033079) - T[320-802] 2.3E-215 - T[808-919] 2.3E-215 - T[907-1307] 2.3E-215 - T[1283-1524] 2.3E-215 - T[1535-1585] 2.3E-215 - T[1615-1946] 2.3E-215 |
| SMART |
FN3_dom (IPR003961) - T[361-440] 2.4E-5 - T[451-525] 6.0E-6 - T[538-614] 3.7E-8 - T[627-705] 5.8E-10 - T[716-792] 2.4 - T[806-886] 2.6E-4 - T[897-976] 1.0E-7 - T[986-1065] 9.7E-6 - T[1080-1162] 3.4E-7 - T[1176-1256] 3.7E-6 - T[1270-1351] 1.2E-4 - T[1362-1440] 1.0E-4 - T[1453-1530] 2.1E-5 - T[1541-1629] 6.3E-11 - T[1641-1720] 0.002 |
| Gene3D |
Ig-like_fold (IPR013783) - T[361-452] 5.1E-15 - T[453-537] 4.0E-16 - T[538-625] 1.1E-14 - T[626-714] 1.6E-18 - T[715-804] 3.3E-8 - T[805-897] 4.4E-16 - T[898-984] 3.0E-18 - T[985-1068] 2.9E-15 - T[1075-1173] 1.7E-12 - T[1174-1269] 1.4E-12 - T[1270-1361] 1.2E-11 - T[1362-1451] 1.9E-10 - T[1452-1538] 2.9E-15 - T[1539-1638] 7.2E-16 - T[1639-1730] 1.4E-12 |
| CDD |
FN3_dom (IPR003961) - T[363-449] 3.24242E-7 - T[452-536] 9.85949E-8 - T[539-618] 4.13742E-8 - T[628-715] 6.83598E-12 - T[807-895] 6.74619E-10 - T[898-985] 2.86009E-10 - T[988-1060] 1.53237E-10 - T[1083-1172] 2.67138E-10 - T[1178-1266] 1.79428E-11 - T[1272-1358] 2.31141E-4 - T[1363-1449] 3.41568E-4 - T[1456-1539] 6.67574E-7 - T[1542-1639] 6.14099E-12 - T[1643-1729] 3.02833E-7 |
| Pfam |
FN3_dom (IPR003961) - T[363-437] 1.8E-10 - T[453-525] 5.3E-11 - T[539-613] 7.2E-11 - T[628-699] 7.6E-16 - T[808-883] 3.7E-10 - T[898-977] 2.6E-12 - T[988-1060] 7.4E-13 - T[1082-1158] 4.4E-10 - T[1178-1249] 8.2E-9 - T[1272-1346] 8.7E-8 - T[1454-1527] 2.2E-10 - T[1543-1627] 7.5E-13 - T[1643-1715] 8.8E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[363-456] 15.645 - T[540-628] 12.032 - T[629-718] 18.107 - T[719-805] 6.525 - T[808-898] 14.872 - T[899-990] 18.919 - T[991-1080] 12.19 - T[1082-1176] 13.436 - T[1178-1269] 15.298 - T[1272-1361] 13.886 - T[1364-1452] 11.275 - T[1455-1542] 13.278 - T[1543-1644] 16.016 - T[1645-1735] 8.277 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[364-531] 1.91E-16 - T[539-699] 4.36E-21 - T[718-889] 7.51E-16 - T[898-1060] 1.93E-23 - T[1082-1267] 1.36E-19 - T[1269-1358] 3.32E-12 - T[1364-1529] 5.01E-15 - T[1542-1722] 5.22E-20 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[1728-1946] 8.5E-77 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1731-1945] 57.303 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1735-1943] 2.69432E-97 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1735-1944] 9.3E-105 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[1737-1944] 4.3E-68 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[1899-1911] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TENA_HUMAN | 29.415 % | 799 | 0 |
| TENR_HUMAN | 31.356 % | 479 | 2.38E-142 |
| TENN_HUMAN | 28.585 % | 446 | 1.18E-131 |