- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C9.133.v3....'
Transcript Model
Transcript Id
KH2012:KH.C9.133.v3.A.ND3-1
Possible name(s)
UNC5B; UNC5C; UNC5D
Gene model
Location
KhC9 [5,042,941 / 5,066,709]
Amino acid sequence
Length: 606
>KH.C9.133.v3.A.ND3-1
RSGLIDKRCRNLVFTVRRDRRKMPGPLFVLVLLFAKSLGESLPENFKDDLEIRGLLKDIS
EPNLQTSAAQQSLKESEQTVVERNPASVTLTTEREHAPTMVDEYEPTLPLFLVEPTDQYV
VRSTPARITCQVTSANEALIKCNNRWLSSPTSRTSQTEDPETGKTITTISIEVTRNTLDS
FFAPYTYWCQCVAWSGAGEVKSRRALVKLAFLRRNFEQEPMADRVAVGDEYKLQCKPPAG
QPKPIVEWLKNDQPLTSSKNSNFLVTEDGDLIIQTRNVEDSGNYTCVAKNIASKRRSHTA
TLTVGVKGGWSNWSPWTGCTEKCGIGVQRRIRRCNNPAPQNGGANCAGETTQTMTCHKQC
PVDGRWTDWSMWSTCSPECLHRRRRTCTRPTPQNSGRVCPGADIETKNCTDGLCTAIRGQ
TESTENQNLILYSCLFVALGLLLMIVIATLVILKRKRTTVSRSSSYTGGRPMGPYSTAPR
NGGIHDDFCIIPTKPPVVGDAPPFAFQQQYPSLRDHSYQPCGRTPKQCESDKYQKYGYSN
DEKNYHIILCSRDEHSVCYHGSSMQRGKHAYQAKTLSHGNSPTKEKCGTIDGAPPNGFIK
LRRNRH
Nucleotide sequence
Length: 2,386
>KH2012:KH.C9.133.v3.A.ND3-1
GAGATCGGGTTTGATAGACAAGCGCTGCCGCAATCTAGTGTTTACAGTGAGGCGAGATCG
ACGCAAAATGCCCGGTCCTCTATTTGTACTGGTTCTGTTGTTTGCCAAATCTCTTGGAGA
GTCTCTTCCGGAAAACTTTAAAGACGACTTGGAAATTAGGGGTCTGTTAAAAGACATTTC
GGAGCCGAACTTACAAACTAGCGCAGCTCAACAAAGTTTAAAGGAGTCGGAGCAGACGGT
GGTTGAACGAAATCCCGCTTCGGTTACATTAACAACAGAAAGAGAACACGCCCCAACCAT
GGTTGACGAATACGAGCCGACGTTACCGCTGTTTCTTGTCGAACCGACCGATCAATACGT
GGTAAGGTCCACACCAGCTAGGATCACGTGCCAAGTGACGTCAGCGAACGAAGCTCTTAT
TAAATGCAACAACAGGTGGTTGAGCAGTCCTACCTCACGCACAAGTCAAACCGAAGACCC
AGAAACGGGTAAAACAATCACAACTATTTCGATCGAGGTTACGAGGAACACACTCGATTC
GTTCTTTGCCCCTTACACATATTGGTGTCAATGCGTTGCGTGGAGTGGGGCGGGGGAAGT
CAAAAGTAGGCGGGCGTTGGTTAAACTTGCATTTTTACGACGGAATTTTGAGCAAGAACC
GATGGCTGACCGAGTGGCAGTCGGGGACGAATACAAACTTCAATGTAAACCCCCAGCTGG
ACAACCCAAGCCTATTGTTGAGTGGTTAAAGAACGACCAACCGTTGACGTCATCGAAAAA
TTCGAATTTCTTGGTCACTGAGGACGGAGATCTGATTATACAAACGAGGAACGTCGAAGA
CTCGGGCAATTATACGTGTGTTGCAAAGAACATTGCTTCGAAACGACGAAGCCACACAGC
GACATTGACCGTTGGAGTTAAGGGAGGTTGGAGCAACTGGTCCCCATGGACTGGATGCAC
AGAGAAGTGTGGCATCGGTGTTCAGAGGAGGATACGAAGATGTAACAACCCAGCTCCACA
AAACGGGGGAGCTAATTGTGCGGGAGAGACAACTCAGACTATGACGTGTCACAAGCAATG
TCCAGTTGATGGTCGTTGGACAGACTGGTCAATGTGGTCAACTTGTAGCCCTGAATGTCT
ACACAGGCGACGACGAACATGTACACGACCAACCCCTCAAAACAGCGGGCGAGTTTGCCC
GGGAGCCGATATTGAAACTAAGAACTGCACGGACGGCCTTTGCACCGCTATCCGAGGCCA
GACGGAATCAACCGAAAATCAGAACCTGATCCTGTACAGCTGTTTGTTTGTTGCTCTTGG
TTTGTTACTAATGATCGTCATAGCAACTCTCGTTATTTTGAAAAGGAAACGAACCACCGT
ATCCAGATCATCTTCTTACACTGGGGGTCGCCCTATGGGACCTTACTCAACAGCGCCGCG
TAACGGCGGAATACACGACGATTTCTGTATCATACCGACCAAGCCACCGGTGGTAGGGGA
TGCGCCACCTTTTGCGTTCCAACAACAATATCCCTCTCTACGTGATCATAGTTACCAACC
TTGTGGTCGCACACCAAAACAATGCGAATCGGATAAATATCAGAAGTACGGTTACTCCAA
CGACGAAAAGAACTATCACATAATACTTTGTTCACGAGACGAACACAGTGTGTGCTACCA
CGGTAGCAGCATGCAACGAGGAAAACACGCTTACCAAGCGAAGACTCTATCTCACGGAAA
TTCGCCAACTAAAGAAAAATGCGGGACCATCGACGGGGCACCACCCAACGGCTTTATTAA
GCTACGACGGAACCGTCACTAGTGGGCGGTCTGGCTCGCTAAGTCACAAGCATGTCACTT
TTGCCGATGGAAAAATGATCGTCGCGTCAGAATACGACTCTGGTTTCGAAGGCGAATCCA
TTCACGCAAATAGTGTGGTCAACGGCCATGCGAATGATATTCAACGTGAAGGTAGCGAAT
ACTCGGACGCAGGTTATAGCGTTTCCAGCTCTAGTGCTGTCGGGGAAATGGATGCCAACT
TTACCGGCATTCTGAAAGAGCAATCGCAACAAGATACTGAAATGTACCAACACACGTAAC
GGAGCTGTTGTGCTTTTACTTTCAATACGTCGGGGTCCCAGGATGGAATGCTTTACATAC
GGGGGAGGGTTTGACCATATTATAAGCAATTCAGTGTTACAGTACGGAAGAAGCAGCGCT
ATTTACATTCAGTATCCGGATGCGTTACTGACCAAACTGAAGCTGCTACGAATGCAGTCT
TGTTCTTTTGTTTTTTTGTGCAGTTATATAAAGTCGCATGTGCTTTTACTGTTCGAACTT
TTACTTTTTTCTATGCATCGGCAAATAAACAAACAACATAATATAA
| Gene3D |
Ig-like_fold (IPR013783) - T[106-214] 2.1E-29 - T[215-308] 4.2E-21 |
| PANTHER |
UNC5 (IPR037936) - T[107-458] 6.7E-122 |
| Pfam |
Ig_I-set (IPR013098) - T[215-304] 1.1E-16 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[218-307] 9.11E-19 |
| SMART |
Ig_sub (IPR003599) - T[220-305] 2.0E-5 |
| SMART |
Ig_sub2 (IPR003598) - T[226-293] 2.8E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[228-303] 11.896 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[306-357] 1.83E-14 - T[360-414] 1.31E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[307-361] 13.284 - T[363-415] 11.045 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[309-360] 1.5E-17 - T[361-414] 2.8E-12 |
| SMART |
TSP1_rpt (IPR000884) - T[310-361] 3.3E-12 - T[366-415] 4.4E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[311-360] 8.9E-10 - T[368-414] 0.031 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UNC5C_HUMAN | 44.236 % | 351 | 6.06E-110 |
| UNC5B_HUMAN | 44.417 % | 342 | 1.9E-106 |
| UNC5D_HUMAN | 44.928 % | 325 | 3.4E-100 |