- Clone 'cima818665' >
- Clone 'citb013i19' >
- Transcript 'KH2012:KH.C9.135.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.135.v1.A.SL1-1
Possible name(s)
DDX21; DDX43; DDX50
Gene model
Location
KhC9 [4,739,864 / 4,745,893]
Amino acid sequence
Length: 679
>KH.C9.135.v1.A.SL1-1
NKTWISIMVELYDSPVSTEIPDSPTIIKKKVKKDKKLKKEKKAKKEKSEIPQIATSGEAE
PPKKKRKTSKKGKSEPDVKAEDGTNVDIDDQSPEALGDFNNFRITEQTKVLLKKKGVAYL
FPIQIQSFNHVYDGKDVVAQARTGTGKTLSFAIPLVEKLIMNRCKDYGRPPKVLVMAPTR
ELAIQVRKDFQDISQGLSSVCIYGGTPYFQQERSMRGGVDIVVGTPGRIMDHVQKGNLQL
GSVEHVVLDEVDQMLDMGFAPKVEEILGYAYTEEREGPPQTLLFSATCPPWVRNTSRKYM
RPSETVHVDTIGKSLVRTATTVEHLAIRCQYSDRAECIGNVVQMYSGQHGRAMIFTDTKK
DANELVVCEALQQQKAQVLHGDIEQRQREITLKAYRDGTVRCLVATNVAARGLDIPEIDL
VIQTSPPSDIDSYIHRSGRTGRAGRTGVCVCFYKPREDMMIKKVERVAGIKFKMVGPPQP
KDIVKASVNDAIASLDLVDKKITAEFMKHAEQVASNHAGGAMEALASALAYMAGASDLKS
RSLLNAQADFTTWHLQTQYEIRFAGFVFSTMEQILGKHIRDKIVGMRLTADKLGAVFDLP
NECTEEIDQSWEDSPTLTLKPCDDLPELTERLDSNRSNNRSFGGGRRGGFGRGGGDGGSR
SFGRSAGRNGGFKRRYGQR
Nucleotide sequence
Length: 2,197
>KH2012:KH.C9.135.v1.A.SL1-1
TTAAAACAAAACTTGGATTTCTATAATGGTTGAATTATATGATTCACCAGTTTCAACTGA
AATCCCAGATTCTCCAACTATTATTAAGAAGAAAGTTAAAAAAGATAAAAAACTAAAAAA
GGAGAAAAAAGCAAAAAAGGAGAAATCTGAAATCCCCCAAATCGCAACCAGCGGAGAAGC
TGAACCACCAAAGAAAAAACGAAAGACTTCGAAAAAAGGAAAAAGTGAGCCAGATGTTAA
AGCAGAGGATGGAACCAACGTAGATATTGACGACCAATCACCTGAAGCACTCGGTGATTT
TAATAACTTTCGAATAACTGAACAAACCAAGGTTTTATTGAAGAAGAAAGGAGTGGCGTA
TCTATTCCCCATCCAAATCCAATCCTTCAATCATGTTTATGACGGGAAAGATGTCGTGGC
ACAAGCACGTACTGGAACTGGGAAAACACTTTCATTCGCGATTCCCCTTGTTGAAAAATT
GATCATGAATAGATGTAAAGATTATGGAAGACCTCCAAAGGTTTTGGTGATGGCACCAAC
AAGAGAGCTAGCAATTCAAGTTCGCAAAGATTTCCAAGATATTTCACAAGGATTGTCATC
AGTTTGTATTTATGGGGGAACTCCATATTTTCAACAAGAGAGATCAATGCGTGGGGGGGT
GGATATTGTGGTTGGAACTCCTGGGAGGATAATGGACCATGTTCAGAAAGGAAATTTACA
ATTAGGATCAGTTGAACACGTTGTATTAGATGAAGTTGACCAAATGTTGGACATGGGGTT
TGCTCCCAAGGTTGAAGAAATATTAGGTTACGCGTATACAGAAGAGAGAGAAGGCCCGCC
TCAAACCTTATTATTCTCGGCCACTTGCCCCCCATGGGTCCGTAACACATCGCGTAAATA
CATGAGACCAAGTGAAACAGTTCATGTTGATACTATCGGGAAGTCTCTCGTTCGAACAGC
GACGACGGTTGAACATCTTGCCATTAGGTGTCAGTACAGCGACAGAGCAGAATGCATCGG
TAATGTTGTACAAATGTACAGCGGGCAGCATGGTCGTGCCATGATATTCACTGACACCAA
GAAAGACGCGAACGAACTGGTTGTATGCGAGGCACTACAACAGCAGAAAGCACAAGTATT
ACATGGGGATATTGAACAGAGACAACGAGAGATAACACTAAAGGCATACAGGGATGGCAC
GGTTCGGTGTTTAGTTGCCACCAATGTTGCGGCACGTGGCCTTGACATCCCAGAGATTGA
CCTCGTTATACAAACAAGCCCTCCTTCTGACATCGACTCATACATCCATAGATCAGGTCG
TACAGGTCGCGCTGGAAGGACAGGGGTTTGTGTTTGTTTCTATAAACCTCGTGAAGATAT
GATGATAAAGAAAGTTGAAAGAGTTGCCGGGATCAAATTCAAGATGGTTGGCCCACCACA
ACCAAAAGATATTGTGAAAGCCTCAGTTAACGATGCCATTGCTTCGCTTGATCTCGTGGA
TAAGAAGATCACAGCTGAGTTCATGAAACATGCAGAACAAGTTGCCTCTAATCATGCAGG
AGGAGCAATGGAAGCATTAGCGAGTGCCCTTGCTTATATGGCAGGTGCATCGGATCTAAA
GTCAAGATCGCTATTGAATGCACAAGCTGACTTCACAACCTGGCATCTACAAACACAATA
CGAAATACGATTCGCTGGCTTCGTGTTTTCAACTATGGAGCAAATCTTGGGTAAACATAT
TCGGGACAAGATTGTTGGAATGAGGCTTACTGCGGATAAACTGGGAGCAGTGTTTGACCT
CCCCAATGAATGTACGGAGGAAATTGATCAAAGTTGGGAGGATTCCCCAACCCTCACCCT
TAAGCCATGTGATGATCTCCCCGAGTTAACAGAGAGGTTGGATTCGAATCGGTCAAATAA
CCGGAGTTTTGGGGGAGGAAGGCGCGGGGGTTTTGGCAGAGGAGGTGGTGATGGGGGGTC
CAGAAGTTTTGGAAGATCAGCGGGGAGAAATGGGGGTTTTAAAAGAAGATACGGCCAAAG
ATGATCATAATCTATTCATTCCAATTCTAGTAAAAGATAGTTGATTTCTATTTATTATCT
TGTTACCTGAAAATACAACGGAACCGGGAAATTTGTGTGTTTTGTGTTTTAATGTACAAA
GCTGAGAAAATACAAAAGCGCAAATTATTGTAAAACA
| SMART |
Helicase_ATP-bd (IPR014001) - T[116-325] 2.3E-50 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[121-292] 4.0E-44 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[128-306] 29.189 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[129-456] 8.18E-65 |
| CDD |
Helicase_C (IPR001650) - T[332-450] 1.32025E-32 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[340-484] 22.131 |
| Pfam |
Helicase_C (IPR001650) - T[346-444] 5.3E-26 |
| SMART |
Helicase_C (IPR001650) - T[365-444] 6.2E-27 |
| Pfam |
GUCT (IPR012562) - T[534-628] 4.1E-26 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[538-620] 1.79E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX21_HUMAN | 50.556 % | 593 | 0 |
| DDX50_HUMAN | 52.206 % | 545 | 0 |
| DDX43_HUMAN | 33.99 % | 209 | 1.29E-58 |