- Transcript 'KH2012:KH.C9.180.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.180.v2.R.ND2-1
Possible name(s)
BRF1; BRF2; GTF2B
Gene model
Location
KhC9 [5,518,174 / 5,521,773]
Amino acid sequence
Length: 320
>KH.C9.180.v2.R.ND2-1
TAVFGQMAGRNYLHQIHCPQHPDAALVEDYRAGDMICPECGLVVGDRTIDVGSEWRTFSN
DKDSKDMSRVGDSQNPLLSGSDLSTIIERPSGPPGSSNDNGFSQFSNRKTMNNSDRVLIH
AFREISSMADRISLPKNIVDRSNKLFKQVYDSKSLRGRANDAISAACLYIACRQEGVPRT
FKEICAISRISKKEIGRSFKLIVKNLETNVEVITSGDFMSRFCSNLNLPPYVQRGATYIA
RKAVEKDLVAGRSPISVAAAAIYMASQASKEKRSQKEISEIAGVAEVTIRQSYKLMHPRA
KDLFPEDFNFHIPVSQLPTF
Nucleotide sequence
Length: 1,447
>KH2012:KH.C9.180.v2.R.ND2-1
GATGAATCAGTTTCATTAAATGCACAGCGTATAGTTATACTGATTTTAAACCGCTGTGTT
TGGTCAAATGGCTGGACGGAACTACCTTCACCAGATCCACTGCCCTCAGCATCCAGACGC
AGCTCTGGTTGAAGATTATCGCGCTGGCGATATGATTTGTCCTGAATGTGGGCTCGTGGT
TGGAGACAGGACAATTGATGTTGGATCAGAATGGAGAACATTTTCAAATGACAAAGATTC
AAAAGATATGTCTCGTGTTGGAGATTCACAAAACCCATTATTGTCTGGAAGTGATTTATC
CACAATTATTGAGCGACCATCTGGACCACCAGGTTCTTCTAATGATAATGGTTTCTCCCA
GTTTTCTAATCGTAAAACAATGAACAACAGCGATCGTGTCCTGATCCATGCTTTTCGGGA
AATATCATCAATGGCTGATAGAATAAGTCTGCCAAAAAATATTGTGGATCGTTCAAACAA
ACTGTTCAAGCAAGTGTATGATTCTAAAAGTTTAAGAGGTCGAGCAAATGACGCAATCTC
TGCTGCATGTTTGTACATCGCGTGTAGACAAGAAGGGGTACCACGAACCTTTAAAGAGAT
TTGTGCTATTTCACGAATCTCAAAAAAAGAAATCGGAAGATCTTTTAAGCTAATTGTAAA
AAATCTGGAGACAAATGTGGAAGTTATAACATCTGGAGACTTTATGTCGCGTTTCTGTTC
CAACTTGAATCTGCCGCCTTACGTGCAAAGAGGAGCCACATACATTGCTAGGAAAGCTGT
AGAGAAAGATCTGGTGGCAGGTAGAAGTCCAATATCAGTTGCTGCTGCTGCTATCTACAT
GGCTTCACAGGCGTCCAAGGAAAAACGATCACAGAAAGAGATCAGTGAAATAGCAGGAGT
AGCAGAAGTGACAATACGTCAGTCGTATAAACTGATGCATCCTCGGGCCAAAGATCTCTT
TCCAGAAGATTTCAATTTTCATATTCCAGTCTCACAACTTCCTACCTTTTAATGAAATCT
CATTCATTTTAATAACACCAAGCTCCAAACATGTTATTTGGTATAGTGGTATTGTATGTG
CAACATTATACAGGATATACCAGAATTGACCACCCTCTAAATATATTGAAAGATGCCATT
GATTGATGGTCAAAAAGCAACAAAAACTTAAATGCCAAAAATTGTATCATATCTCAGTAG
TGGCACCTATAGTATTGCTATAGTAAATACTTCTTCCTATTTTCAGAAACCTTTTTTATG
GGTGCAATGACTTTGATTTTGTTATTTAGTACGTAATTCGATATAGGTGGAATTTAAAAA
TGCAGTTTCATTGTATTAAGAAATAGGATAACTGTACGCACGCCGGCTGAATTCGCTATG
AATAAATAGCGGTTTAACGTACATTGACTTTCCTATTGTTATTGTTCGAGTACAAGGTGG
GTTTAAA
| PANTHER |
TFIIB (IPR000812) - T[14-310] 1.4E-101 |
| ProSiteProfiles |
Znf_TFIIB (IPR013137) - T[14-45] 8.909 |
| Pfam |
Znf_TFIIB (IPR013137) - T[18-58] 7.8E-13 |
| PRINTS |
TFIIB (IPR000812) - T[30-50] 1.2E-70 - T[52-65] 1.2E-70 - T[66-87] 1.2E-70 - T[165-184] 1.2E-70 - T[191-206] 1.2E-70 - T[218-236] 1.2E-70 - T[252-268] 1.2E-70 - T[284-298] 1.2E-70 |
| SUPERFAMILY |
Cyclin-like_sf (IPR036915) - T[118-211] 7.35E-27 - T[213-320] 9.19E-33 |
| CDD |
Cyclin-like (IPR013763) - T[118-203] 4.88962E-14 - T[217-297] 1.83858E-16 |
| SMART |
Cyclin-like (IPR013763) - T[123-204] 2.8E-11 - T[217-298] 7.5E-13 |
| Pfam |
TFIIB_cyclin (IPR013150) - T[125-195] 2.8E-23 - T[219-289] 1.1E-25 |
| ProSitePatterns |
TFIIB_CS (IPR023486) - T[251-266] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TF2B_HUMAN | 74.026 % | 477 | 3.31E-171 |