Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.199.v3.A.SL5-2

Possible name(s)

LRRFIP1; LRRFIP2

Gene model

KH2012:KH.C9.199

Location

KhC9 [3,603,182 / 3,614,363]

Sequences

Amino acid sequence

Length: 438

>KH.C9.199.v3.A.SL5-2
STSLRTYLNMSTTGRRRTGRSQNVEDETLSQIAKEAEARLAQKRAARIEAREIRMRELEK
QQREAQELNEKSIKNSIPLSKAPNTGSSIPSYNHTDQHTPYKNGSFDNLTTDATPEVLKK
ALRDMENKYNEAMVQTAQLDNEKTQLHYQTQKLLDSLEEQEDDFYRLKKKHKEKCQELEK
QKRGFDVLRRKCNDLQDALRQRDELIEVAKEKNLEKVIFDLKETIMWKDKKIEAIVRQIE
YYKKNESSGQNNHEQGLIFIGNNSESTVEHDGQGDATELMNAPTIDSKVSILTEENRQLL
EQVQNLKLMLEEVRASVTEKDSNDLNSSLGATEMQLLEIQREANKQVNEYKFKLQKSEQD
LAVFHGNISRLESQLIRYKQTSETYEKNEDEMRAEKRKLMRDLRTALDRIEEVEMTNSHL
EKRLERLRASRTALSGPS

Nucleotide sequence

Length: 1,668

>KH2012:KH.C9.199.v3.A.SL5-2
TTTCTAATAGCTGTGTTCATGGATATAAATATCAGTGTTTTTAGATTAAAAAAACTTAAA
ACTGAAGCACAAGTTTAAGGACCTATTTGAACATGTCAACTACAGGCAGGAGGCGAACTG
GGAGAAGTCAAAATGTTGAAGATGAAACTTTAAGCCAAATTGCAAAAGAAGCAGAAGCAA
GACTTGCACAAAAACGAGCAGCTCGTATTGAAGCTCGGGAAATTCGAATGAGAGAACTTG
AAAAACAACAAAGAGAGGCTCAAGAACTGAATGAGAAAAGCATAAAAAATTCTATTCCTT
TATCTAAAGCTCCAAATACTGGAAGCAGCATTCCCTCATACAACCACACTGATCAACATA
CACCTTATAAAAATGGTAGTTTTGACAACCTTACCACTGATGCAACACCTGAAGTTTTAA
AGAAAGCACTGAGGGATATGGAAAATAAATACAACGAAGCAATGGTTCAAACTGCTCAAT
TAGATAATGAAAAAACTCAGTTACATTATCAAACCCAAAAGTTGTTGGATTCATTAGAAG
AGCAAGAAGACGACTTTTACCGTTTAAAAAAGAAACACAAAGAAAAATGCCAGGAACTTG
AAAAGCAAAAGCGAGGTTTTGATGTTCTGCGTAGAAAGTGCAACGATCTCCAAGACGCGT
TACGTCAACGGGATGAACTCATAGAGGTAGCAAAGGAGAAAAACCTCGAAAAAGTTATTT
TTGACTTAAAAGAAACAATTATGTGGAAAGATAAAAAAATCGAGGCAATAGTCAGGCAAA
TTGAATATTACAAGAAGAATGAAAGTTCAGGGCAGAATAATCATGAACAAGGTTTGATAT
TTATCGGCAACAACAGCGAATCAACTGTTGAACACGATGGGCAAGGTGATGCAACAGAAC
TCATGAATGCTCCAACCATAGACTCAAAAGTTTCCATTCTTACCGAAGAAAATCGACAAC
TCCTTGAACAGGTTCAAAACCTCAAATTAATGTTAGAAGAAGTAAGAGCGAGTGTTACGG
AAAAAGATTCCAACGATCTAAATTCATCATTGGGTGCAACGGAGATGCAACTTCTCGAAA
TTCAAAGAGAAGCAAACAAACAAGTTAACGAATACAAGTTCAAACTGCAGAAATCAGAGC
AAGATCTTGCTGTTTTTCATGGAAATATATCCCGGCTTGAAAGTCAGTTGATTCGTTACA
AACAAACATCGGAAACTTACGAGAAGAACGAAGATGAAATGAGAGCGGAAAAACGAAAAT
TGATGAGAGACTTACGAACAGCATTGGATCGAATTGAAGAAGTAGAAATGACAAATTCTC
ATCTTGAAAAGCGGTTAGAACGATTGCGAGCATCAAGAACTGCATTATCTGGTCCGTCGT
GATGCATGGATGGCATCAACTACTTGTATACCTTGATGCAGTGCTTGATGTACGCGGAGA
GTTCTTATCAAGGCTTTGCACGTGTAATTTCATGCCATTTTAGTGAAAATATCTTTATTA
AGTTGATTGTATACAAGCTTTTGATTCAACATGCTAAATATTATCCTGTTGCAATTTCAG
TATAAACATTAATTTATGCGTTTATGATTTTGGTTGTTCCCATATGTAAGATCTGGTTTA
AGATGATTTCGTTCTTGTTTAAATTGAAATAAAATGTTTTAAAACTGT

InterProScan

PANTHER	LRRFIP1/2 (IPR019139) - T[11-436] 2.0E-126
Pfam	LRRFIP1/2 (IPR019139) - T[36-361] 4.7E-60

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LRRF2_HUMAN	43.02 %	248	6.62E-75