Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.26.v1.A.SL3-1

Possible name(s)

ECHDC2; ECHS1; HIBCH

Gene model

KH2012:KH.C9.26

Location

KhC9 [1,695,304 / 1,699,007]

Sequences

Amino acid sequence

Length: 407

>KH.C9.26.v1.A.SL3-1
KFPIKILMMNCAKSIRRVLVLSKHIQGAQVSSPVSSISKMRLARCFSSASFAGDDVLFER
IGGAGIITLNRPSALNALNLSMIKKIFPKIKEWEEDPATTMIIMKGAGGKAFCAGGDILS
ITEEGKKGNYEAGQEFFRSEYQLNYRIATCLVPYIAFIDGITMGGGVGLSVHGENRICTE
RTLFAMPETAIGLFPDVGGSYFLPRLSKHLGMYLALTGFRLKGRDVYKAGVATRMVHSTV
LPQLEQDLVAMENPSTQDITDLLRKYHEECQTGRERDYLILRDKEEDIKRMFCADSVEEI
FENLRNDGSEWALEQLSVMEKMSPTSLKITHRQLSLGESLDLSECLEMEYRMGSQCLRHP
DFYEGVRSVLIDKDKSPKWNPATLSGVTEGIVDKHFILPSDGEELQL

Nucleotide sequence

Length: 1,985

>KH2012:KH.C9.26.v1.A.SL3-1
CAGATAACTAGCTGTGCTTCTTGTACTGGATATCTACATTTAACGTTCTTGCGGGGCAAA
TGGGTGTACTTCTCCGCACCTTTCATGAACAGTTACAGTGCATTAGTAAACGTCAGGTGA
GAACGCTCAAACAAACGCAAACTGATCCCTTTAAGAAAACTTTTTGGTCCTGGGTAATTG
CAATCCCTACAGCAGTAATTGGATTTGTGGCAGTGAAATATTTTATCGACAACCAGCGTA
AAATAGAATTGAAAGAATTACAAAGAGCAAGACGTCAACAACAGCAGACTAAAAGTTGAA
AATTTCCCATAAAAATCTTGATGATGAATTGTGCAAAAAGTATTCGAAGAGTTCTGGTCT
TATCTAAACATATCCAAGGAGCTCAGGTTTCATCTCCTGTCTCATCGATCAGCAAAATGC
GACTAGCAAGGTGTTTCTCTTCAGCCTCTTTTGCAGGAGACGATGTTTTGTTTGAACGTA
TTGGTGGAGCTGGAATTATAACTCTGAACAGGCCATCAGCATTAAATGCTTTAAATCTGT
CTATGATAAAAAAAATATTTCCAAAAATTAAGGAATGGGAAGAAGACCCAGCTACTACAA
TGATTATAATGAAAGGTGCAGGTGGTAAAGCTTTCTGTGCTGGTGGTGATATTCTATCAA
TAACCGAGGAGGGAAAAAAGGGAAACTATGAAGCAGGTCAAGAGTTTTTTCGTTCTGAAT
ATCAGTTGAATTACAGAATAGCGACGTGCCTTGTTCCTTACATTGCATTTATTGATGGAA
TAACAATGGGGGGTGGTGTAGGATTGTCGGTTCATGGTGAAAACAGGATTTGCACCGAAC
GTACTTTGTTTGCAATGCCTGAAACTGCAATAGGTCTTTTCCCTGATGTTGGAGGTTCCT
ACTTCCTGCCACGACTAAGCAAACATCTTGGAATGTATCTTGCTTTGACGGGCTTCCGAC
TGAAAGGCAGAGATGTTTACAAAGCAGGTGTAGCTACACGTATGGTTCATAGTACCGTCC
TACCTCAACTTGAACAAGATCTTGTTGCAATGGAGAATCCATCCACACAGGATATAACAG
ACTTACTTCGTAAATATCATGAAGAATGTCAAACTGGGAGGGAACGAGATTATCTCATCC
TTCGTGATAAAGAAGAAGACATAAAGAGGATGTTTTGTGCCGATTCTGTGGAAGAAATTT
TTGAGAATTTAAGGAATGATGGAAGTGAGTGGGCACTTGAACAACTCAGTGTGATGGAAA
AAATGTCGCCTACTTCGTTAAAGATCACCCACAGACAACTAAGTCTTGGGGAAAGTCTTG
ATCTGAGTGAGTGTTTGGAAATGGAATACAGGATGGGCAGCCAATGTTTGAGACATCCTG
ACTTTTATGAGGGGGTTCGTTCCGTTCTTATTGACAAAGATAAATCACCGAAGTGGAACC
CAGCTACTTTGTCTGGTGTAACGGAGGGTATTGTAGACAAGCACTTCATACTGCCCTCTG
ATGGTGAAGAGTTGCAACTGTAAAAGTCTTCCTGTCTGTTGTTCAATTTGCATAATTGCT
TTTTACTTTCGTTTCAATTTGTTCTCTTTTCAACGAGTTTTGCAATTTTAAAAACGGATC
AACAAACGTGAAGAACGGCTAAGTTCAATTCTTCAGCTTCTGATTCAATATCTTCAAAGC
AAGCTTTCCAAAAGTAATTTAAACAACTTAAAAAGGCAGACTAACACCTTTATAACCTGA
TCCAATACAAATTGCATTCGTTTTTTTCTTCAGGATATTCTCTGTAATTCAAGGTGGTTC
ATTTCGCAGGTGTTAAAGTCGCATAAAATATAATTTCGTTTTGCGTTACCCATTCGGTGC
GAAGTTTTAACGTCCGAGTTTCATCCACCAAGCAAACGACCGCTCGGATGAAATGCATGC
GCTTGTACAATGCAGTGTTATCACACCACAGTAGCTTGCGAATAAATAGTCCGACGTTGG
AATAA

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[54-238] 8.16E-64 - T[306-382] 8.16E-64
Pfam	HIBYL-CoA-H (IPR032259) - T[65-396] 1.1E-132

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHM_HUMAN	35.26 %	95.5	3.16E-22
HIBCH_HUMAN	58.286 %	418	2.11E-145