- Transcript 'KH2012:KH.C9.299.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.299.v1.A.ND1-1
Possible name(s)
GP5; LRRC15; LRRTM2
Gene model
Location
KhC9 [2,053,569 / 2,057,995]
Amino acid sequence
Length: 589
>KH.C9.299.v1.A.ND1-1
EKQKMTFSSAQVFLCLGLQLLFHETISASPTKHCSNKGNVQRCHYQYLSRILRCDGRSRN
SLPSPTELQGPAPPSTALSIYINSSCLQEIDSGQLRQYTHAKQLNYDDNMIQTIPKSCFS
HLHLEELILSRNSISTINSAFNGLSHLKTLHLNGNQLQEILDDHFSELLSLTSLDLSDNM
LTYVHRNAFEGLTSLTSLDLSNNRLTKFEPGHLSGLVNLNKLRLRSNHLQSLDSHLLVSS
PHLEVVDLSFNRLQCLPANLFDNQSDLKSVLLMSNQLRTPHPDWFRSIVANGRMPDVNLM
QNNKWLCDCHSISYRNFLLNEITEHEDQWIDKLDVRCFQPATNEGKYLSDVKHFGSNCPY
PLEPLECEQQESSTRTTTTNVPRPTTTTTTTKSTTTEKSTTIKAKINSRSQVTTTITLPV
NTPLVLNLGADLPTKEDKSPLMIIIISLVAVLCFAILGMAVYCMRRKWKKEKLVKKQNNN
RMTNKDDEAGQNLYEEPEIKMDDQTIDNQTGPKLLYSASSLSLNEIEPQLYQAGEIPNPT
NRKYRKRTDSGFEEEKLPSQALETEERISHTSYYDGRSVLDGLDPLEEA
Nucleotide sequence
Length: 2,250
>KH2012:KH.C9.299.v1.A.ND1-1
GGTTATGTGCAGGGTCACAAAATGTAAAGTATAAGAGTAGGGTTGAGTGACCAATACTCT
TATTAAGTGTTGGTTGTTGTTATGAGAAAAACAAAAAATGACATTTTCATCTGCGCAAGT
TTTTCTATGTCTTGGTTTACAATTACTTTTTCATGAAACAATATCAGCTTCTCCTACAAA
ACATTGTAGCAACAAAGGAAATGTGCAAAGATGCCATTATCAATATTTGTCGAGAATACT
AAGGTGTGACGGCCGTTCACGTAACTCCTTGCCTTCTCCCACTGAGCTACAAGGCCCAGC
CCCACCCAGCACTGCCTTATCAATATACATCAACTCAAGTTGCTTGCAAGAAATTGACTC
AGGTCAACTGCGGCAATACACCCATGCAAAGCAATTAAACTATGATGATAACATGATACA
AACTATTCCCAAGTCATGCTTCAGTCATTTACATCTAGAAGAACTTATATTATCACGGAA
TTCAATTTCAACCATTAATAGTGCTTTTAATGGGTTATCTCATTTGAAGACATTACACTT
GAATGGGAACCAGTTACAGGAAATACTTGATGACCATTTTTCTGAATTACTCAGTTTAAC
TAGCCTTGATTTGAGTGACAACATGTTAACCTACGTGCACAGAAATGCTTTCGAAGGTCT
AACGTCTTTGACCAGTCTTGATCTAAGCAACAATCGACTTACTAAGTTTGAACCTGGACA
TTTAAGCGGCCTAGTGAACTTAAATAAGTTGCGTTTAAGAAGTAATCACTTACAAAGCCT
TGATAGCCACTTGTTGGTGTCATCTCCACATTTGGAAGTTGTTGACCTCAGTTTTAACAG
ACTTCAATGTTTACCTGCCAACCTGTTTGATAACCAAAGTGACCTGAAATCAGTTCTACT
CATGTCAAACCAACTTCGTACTCCACATCCAGATTGGTTTCGAAGTATCGTTGCAAATGG
GAGGATGCCGGATGTAAATTTAATGCAAAACAACAAATGGTTGTGTGATTGCCATTCAAT
AAGTTACAGAAATTTTCTTTTGAATGAAATAACCGAGCACGAAGATCAATGGATTGATAA
ATTGGATGTTAGGTGCTTTCAACCTGCAACGAATGAAGGAAAATATCTAAGTGATGTAAA
ACACTTTGGAAGCAACTGTCCTTATCCATTAGAACCATTGGAATGTGAACAGCAAGAGTC
TTCAACAAGAACAACAACAACAAATGTTCCAAGGCCAACAACAACAACAACAACAACAAA
ATCAACAACAACAGAAAAATCAACAACAATTAAAGCAAAGATAAATTCTAGGAGCCAAGT
TACAACAACAATTACTCTTCCTGTCAATACTCCATTGGTGTTAAACCTAGGTGCAGATCT
ACCAACCAAGGAAGATAAGAGTCCATTGATGATTATCATTATTTCTTTAGTCGCAGTTTT
ATGTTTTGCTATTTTAGGAATGGCTGTTTACTGTATGAGACGCAAATGGAAAAAAGAGAA
GTTGGTGAAAAAGCAAAATAATAATCGTATGACCAACAAAGATGATGAAGCAGGACAAAA
TTTGTACGAAGAGCCAGAGATAAAAATGGATGATCAAACAATCGACAATCAAACTGGACC
AAAGCTTCTTTATTCTGCATCAAGTTTAAGCTTAAATGAAATTGAGCCACAGTTGTACCA
AGCCGGTGAAATTCCTAATCCTACAAACCGTAAATACCGTAAACGTACAGACAGCGGTTT
TGAAGAGGAAAAATTACCTTCCCAAGCGCTTGAAACTGAAGAGCGAATTAGCCACACATC
ATATTATGATGGAAGAAGCGTTTTAGATGGGCTAGATCCGCTCGAAGAAGCATAATGCTC
ACATTATTAACTAAAACGTGTATATGCTTTTCATTCGAAATATACCATATGGTAAACATG
ATGATCAAGCTTTCTTTATTATGTGCACTAAAAACAAGTGGATTAAATAAGTTCAATATT
TATGCATTTTTATAGTAAATAATTCATATATAAGTCACTGTAACAACCTTTTGAGGATGA
AATGCGATTTCTAAAAATGTACCCAACTCGCTTTGTAAACTATACACTTACACTAGCACC
TCTTACTTTTTTATTTGCTTTCATAAAATGAATGCTTAACACGCTAACTGTTTTAACTAC
GCATTCCAAATAACTCGCATTGCATGTATAATCACGTGTGTAAATACCGTGTAAAAGTTC
AAACTAAATGAATAAACACGCAAGTAGTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[41-220] 1.7E-34 - T[221-361] 3.2E-19 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[100-121] 4.886 - T[123-145] 6.526 - T[146-167] 7.15 - T[170-191] 6.38 - T[194-215] 7.766 - T[218-239] 6.364 - T[242-263] 6.264 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[123-143] 57.0 - T[144-167] 0.84 - T[168-191] 7.9E-4 - T[192-215] 0.07 - T[216-239] 10.0 - T[241-263] 0.35 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[145-205] 3.3E-15 - T[242-263] 0.93 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC15_HUMAN | 27.415 % | 103 | 4.28E-23 |
| GPV_HUMAN | 32.27 % | 93.6 | 5.04E-20 |
| LRRT2_HUMAN | 26.205 % | 92.8 | 7.8E-20 |