- Transcript 'KH2012:KH.C9.315.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.315.v1.A.SL1-2
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
KhC9 [3,639,351 / 3,652,164]
Amino acid sequence
Length: 1,167
>KH.C9.315.v1.A.SL1-2
VFNGYITGEKMPLSRHPAPLQESKWEKKHQNQEKNIKSVKPLVAYQSFSSSSDSDSKPLR
NKVEKVVKTVSKSVKSDQHKSSQRTVTIKSSVIPTTSKREVKVKVESKEHKRSKDKKEFR
FNSNHTNTSKQRKEKSKESSTRRKSSSSKSTADRNFSDFTSESEENCDAMDRRPHHPYDA
RGYPPRSPFRRHNDGWGRYDGPRSPPHGYPPRYVQRPALPIIRRSVTPPHSPRYHSPPSR
REVYNEPRFMDQDRRFDNQSPHYGHPMHSPRQKSGFGSGNQDIDMRPETAALNPHIDMLH
NTSLNSKQNITAHPRTDERKSRDRLPQDENQRKSAARDRSSSRSHSRSKHRKHKKHKRSR
SSHHRHHSKRSRSKRHSSSNSSAESTDSNNDDQHSDSSQTTRSSQKSKTEALTSNLMTVK
DLAAQLSENRKKLKEEEEKSHRKRKHKHHKRRKDKKRKTSRKRKAESSESHSEVENEIHS
VPLPSEATLTHNEQNTSINQQVLVTVSSNEIMNGNLLSKPHLFQTIYLQLRWMRTPRTLT
IVWQCNTHSQSSLKKWLRKLILQMKYRQRSNLLHFPTDWSNRILQPTNQQRAIYNQPMIK
NLKEDVVPTKKGLHDLPLPPILPSLSTTDDEPAHTPPHSDKDQVKKKRPKICGPRTREVV
QTENDWGSMCVDEYAFISITGEGTFGQVYKARDKHTDEICALKKVRLDNEREGFPITAVR
EIKILRQLQHRNIVCLKDVLTDKSDATDFRKEKECAFYLVFEYMDHDLMGLLESGMVHFN
ENHIKSFMKQLLDGLNHCHKKGFLHRDIKCSNILLNNKGEIKLADFGLARFFNKDEQRPY
TNRVITLWYRPPELLLGEEMYTPSIDIWSCGCILAELFTKKPLFQADRELAQLECISRVC
GSPCPAVWPDVIKLPHFHTMKPKRQHRRKLREDFSYLPTLAIDLLDQMLTLDPSKRFTAE
EALNCPWLKNVDTKNMTMPDFPHWQDCHEMWSKKRRKEMRETARLAEGKSATNDKKPAVK
KDTDLRSNKSSDTSNNSSSQPEASSAASADNKSSEQDALVRLMQEKPDMNLAQLAKAWKM
PIDEESVKLLSSVNIKVLFAALSKKNVKDTSSEGLTGLLDQLQKTLGNAVKNSAKEPPTQ
QVNVAPLPSRPGLQGPSSHETSGKFYF
Nucleotide sequence
Length: 3,670
>KH2012:KH.C9.315.v1.A.SL1-2
GTAATTATTGTATGAATAGAAACAATCATATTATGTTATACTAAGTTTTCAATGGCTACA
TCACTGGGGAGAAAATGCCCCTAAGTCGACACCCAGCCCCTCTTCAGGAATCAAAGTGGG
AAAAAAAGCATCAGAATCAAGAAAAAAACATTAAGTCCGTAAAGCCATTGGTTGCTTACC
AGTCGTTTAGTTCATCTTCTGATTCTGACTCAAAGCCACTAAGGAATAAAGTTGAAAAAG
TTGTAAAAACAGTGTCGAAATCTGTGAAGTCCGATCAGCATAAAAGTTCACAGAGAACAG
TTACAATCAAATCAAGCGTTATTCCAACTACAAGCAAACGCGAGGTCAAGGTTAAGGTTG
AGTCAAAAGAACATAAAAGATCCAAAGATAAGAAAGAGTTTCGTTTTAATTCAAACCACA
CAAACACATCCAAACAAAGAAAGGAAAAATCTAAGGAGTCGTCAACAAGAAGAAAATCAA
GTTCAAGTAAAAGTACTGCAGATCGCAATTTTTCCGATTTTACCTCTGAAAGTGAAGAAA
ATTGTGACGCAATGGACCGACGCCCACACCACCCCTATGATGCAAGGGGATACCCACCAA
GAAGTCCGTTTCGAAGGCACAATGATGGCTGGGGGCGATATGACGGACCCCGTTCACCTC
CTCATGGCTACCCACCCAGATATGTACAACGCCCTGCACTTCCTATTATTCGAAGATCTG
TGACCCCTCCTCATTCCCCTCGTTATCACTCTCCACCAAGCAGAAGAGAGGTCTACAATG
AACCACGATTCATGGACCAAGATCGTAGATTTGACAATCAATCGCCTCACTATGGTCACC
CAATGCATTCACCTCGCCAAAAATCCGGCTTCGGCAGTGGCAACCAGGACATTGATATGC
GTCCCGAGACTGCTGCTCTAAATCCTCATATAGATATGTTGCATAATACGTCACTCAACT
CGAAACAAAACATCACTGCTCATCCAAGAACAGATGAACGCAAATCAAGAGATAGATTGC
CTCAAGATGAAAACCAAAGAAAATCTGCAGCTCGGGACAGAAGTAGCTCTCGTTCGCACA
GCCGAAGCAAGCATAGAAAACATAAAAAACATAAACGAAGCAGATCTTCACACCATCGGC
ATCATTCCAAACGATCCAGGTCAAAAAGGCATTCAAGTTCGAATTCTTCAGCAGAAAGCA
CGGATAGCAACAACGATGATCAGCATTCTGATAGCTCTCAGACAACCAGATCATCGCAAA
AGTCGAAAACAGAAGCACTGACTTCAAATCTTATGACGGTGAAAGACTTGGCAGCTCAAC
TTAGCGAAAATCGTAAAAAGCTTAAAGAAGAAGAAGAAAAAAGTCATCGGAAAAGAAAAC
ACAAGCATCATAAACGAAGAAAGGATAAGAAAAGAAAAACAAGTCGCAAACGAAAAGCTG
AAAGCAGCGAGAGTCACAGTGAAGTTGAGAATGAAATACATTCTGTTCCACTTCCATCCG
AAGCTACTTTAACGCACAACGAGCAAAATACGAGCATCAACCAACAAGTTCTGGTTACTG
TAAGCAGCAACGAGATAATGAATGGAAATCTCCTATCCAAACCCCACCTCTTCCAAACGA
TTTACTTGCAGTTGCGATGGATGCGCACACCAAGGACGTTGACCATCGTGTGGCAATGCA
ACACGCACAGTCAATCAAGTTTGAAGAAATGGCTTCGAAAGTTAATTCTTCAGATGAAAT
ATCGTCAGCGCTCGAATCTTCTGCATTTCCCAACAGATTGGTCGAACCGGATCCTCCAGC
CGACCAATCAGCAACGAGCGATCTACAACCAACCAATGATAAAAAACCTAAAAGAAGATG
TAGTTCCAACAAAGAAAGGATTACATGATCTTCCTCTTCCTCCGATCCTTCCATCTTTAT
CAACAACTGATGATGAACCTGCGCACACACCCCCACACAGCGATAAGGATCAAGTAAAGA
AGAAAAGGCCAAAAATATGCGGACCAAGAACAAGGGAAGTTGTTCAAACTGAGAATGACT
GGGGTTCAATGTGTGTAGATGAATATGCATTCATATCTATCACTGGTGAAGGAACGTTTG
GTCAAGTTTATAAAGCAAGAGATAAACATACGGATGAAATATGTGCGCTTAAAAAGGTTC
GATTGGACAACGAAAGGGAAGGTTTTCCGATCACTGCTGTTCGGGAAATCAAAATTCTTC
GTCAGTTACAACATCGGAACATTGTTTGTTTAAAAGATGTTTTGACTGACAAGTCAGATG
CAACTGACTTCAGGAAGGAAAAAGAATGTGCATTCTATCTTGTGTTTGAATACATGGACC
ATGACTTGATGGGGTTGCTGGAATCGGGGATGGTTCATTTTAATGAAAACCACATCAAAT
CCTTTATGAAGCAGCTACTGGATGGACTTAATCATTGTCATAAGAAAGGGTTTCTACACA
GAGACATCAAATGTTCAAATATTCTGTTGAACAATAAAGGAGAAATCAAACTTGCAGATT
TTGGATTAGCAAGGTTTTTCAACAAAGATGAACAACGTCCGTACACAAATCGTGTGATCA
CGTTATGGTATCGACCGCCTGAACTTTTACTTGGTGAGGAGATGTACACGCCGTCTATTG
ATATTTGGAGTTGTGGGTGTATTTTGGCGGAGCTTTTCACCAAGAAACCATTGTTTCAAG
CTGATCGTGAGCTTGCACAGCTTGAATGTATAAGTCGTGTATGCGGTTCCCCATGCCCTG
CAGTATGGCCTGATGTTATTAAACTTCCACATTTTCATACAATGAAACCAAAGAGACAAC
ACAGAAGGAAATTGAGGGAAGATTTCAGTTACTTACCCACGCTTGCTATTGATCTACTCG
ACCAAATGTTAACGTTGGATCCAAGCAAACGTTTCACGGCTGAAGAAGCGCTTAACTGCC
CCTGGCTCAAAAATGTTGACACCAAAAATATGACGATGCCTGATTTTCCTCATTGGCAAG
ATTGCCACGAAATGTGGAGCAAAAAGAGACGAAAAGAGATGAGAGAAACCGCTCGGTTGG
CTGAGGGGAAATCGGCAACAAATGATAAAAAACCTGCAGTGAAAAAAGACACCGACCTAC
GTTCAAATAAAAGTAGCGACACATCCAACAACAGTAGCAGCCAGCCTGAAGCATCTTCGG
CTGCTAGTGCTGACAACAAGTCCAGTGAACAAGACGCATTGGTTCGACTGATGCAAGAAA
AGCCAGATATGAACCTTGCCCAACTTGCAAAAGCATGGAAGATGCCAATAGATGAAGAAA
GCGTCAAACTGTTGTCATCTGTTAATATTAAAGTCCTATTTGCTGCTCTTAGTAAAAAGA
ATGTAAAAGATACATCATCAGAAGGCTTGACTGGTCTATTGGATCAGCTCCAGAAAACGC
TTGGAAATGCTGTGAAAAATTCTGCCAAAGAACCACCAACTCAACAAGTTAATGTTGCAC
CTCTACCATCACGACCAGGATTGCAAGGTCCTTCATCTCATGAAACATCTGGCAAGTTTT
ACTTTTAGAGTTAAATAATAGGGTCTTAGCTTTATTTTTACAATTTCATTCTCACTTTAT
GCAAGGTTTTATGACTAAAAGGTGTTTAATATTACAAAAACTGTCATTTATCAAACTTGT
AATATAGTGG
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[668-972] 1.31E-97 |
| SMART |
Prot_kinase_dom (IPR000719) - T[674-968] 1.7E-95 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[674-968] 44.145 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[676-968] 2.9E-74 |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[803-815] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 46.154 % | 277 | 1.01E-83 |
| CDK13_HUMAN | 58.498 % | 621 | 0 |
| CDK12_HUMAN | 59.69 % | 630 | 0 |