- Transcript 'KH2012:KH.C9.315.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.315.v2.A.SL2-1
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
KhC9 [3,639,370 / 3,652,762]
Amino acid sequence
Length: 1,266
>KH.C9.315.v2.A.SL2-1
VFNGYITGEKMPLSRHPAPLQESKWEKKHQNQEKNIKSVKPLVAYQSFSSSSDSDSKPLR
NKVEKVVKTVSKSVKSDQHKSSQRTVTIKSSVIPTTSKREVKVKVESKEHKRSKDKKEFR
FNSNHTNTSKQRKEKSKESSTRRKSSSSKSTADRNFSDFTSESEENCDAMDRRPHHPYDA
RGYPPRSPFRRHNDGWGRYDGPRSPPHGYPPRYVQRPALPIIRRSVTPPHSPRYHSPPSR
REVYNEPRFMDQDRRFDNQSPHYGHPMHSPRQKSGFGSGNQDIDMRPETAALNPHIDMLH
NTSLNSKQNITAHPRTDERKSRDRLPQDENQRKSAARDRSSSRSHSRSKHRKHKKHKRSR
SSHHRHHSKRSRSKRHSSSNSSAESTDSNNDDQHSDSSQTTRSSQKSKTEALTSNLMTVK
DLAAQLSENRKKLKEEEEKSHRKRKHKHHKRRKDKKRKTSRKRKAESSESHSEVENEIHS
VPLPSEATLTHNEQNTSINQQVLVTVSSNEIMNGNLLSKPHLFQTIYLQLRWMRTPRTLT
IVWQCNTHSQSSLKKWLRKLILQMKYRQRSNLLHFPTDWSNRILQPTNQQRAIYNQPMIK
NLKEDVVPTKKGLHDLPLPPILPSLSTTDDEPAHTPPHSDKDQVKKKRPKICGPRTREVV
QTENDWGSMCVDEYAFISITGEGTFGQVYKARDKHTDEICALKKVRLDNEREGFPITAVR
EIKILRQLQHRNIVCLKDVLTDKSDATDFRKEKECAFYLVFEYMDHDLMGLLESGMVHFN
ENHIKSFMKQLLDGLNHCHKKGFLHRDIKCSNILLNNKGEIKLADFGLARFFNKDEQRPY
TNRVITLWYRPPELLLGEEMYTPSIDIWSCGCILAELFTKKPLFQADRELAQLECISRVC
GSPCPAVWPDVIKLPHFHTMKPKRQHRRKLREDFSYLPTLAIDLLDQMLTLDPSKRFTAE
EALNCPWLKNVDTKNMTMPDFPHWQDCHEMWSKKRRKEMRETARLAEGKSATNDKKPAVK
KDTDLRSNKSSDTSNNSSSQPEASSAASADNKSSEQDALVRLMQEKPDMNLAQLAKAWKM
PIDEESVKLLSSVNIKVLFAALSKKNVKDTSSEGLTGLLDQLQKTLGNAVKNSAKEEPPT
QQVNVAPLPSRPGLQGPSSHETSERSVIASSQGKHKRTTKDGERRTEVQKNDHGHKTNEI
HDKFKVENHNPHHHHSSRAGNLNQSSHSSNEMKHPSASYQSAERRSEKRDSRSDKQFFYS
NGRHNS
Nucleotide sequence
Length: 3,950
>KH2012:KH.C9.315.v2.A.SL2-1
AAACAATCATATTATGTTATACTAAGTTTTCAATGGCTACATCACTGGGGAGAAAATGCC
CCTAAGTCGACACCCAGCCCCTCTTCAGGAATCAAAGTGGGAAAAAAAGCATCAGAATCA
AGAAAAAAACATTAAGTCCGTAAAGCCATTGGTTGCTTACCAGTCGTTTAGTTCATCTTC
TGATTCTGACTCAAAGCCACTAAGGAATAAAGTTGAAAAAGTTGTAAAAACAGTGTCGAA
ATCTGTGAAGTCCGATCAGCATAAAAGTTCACAGAGAACAGTTACAATCAAATCAAGCGT
TATTCCAACTACAAGCAAACGCGAGGTCAAGGTTAAGGTTGAGTCAAAAGAACATAAAAG
ATCCAAAGATAAGAAAGAGTTTCGTTTTAATTCAAACCACACAAACACATCCAAACAAAG
AAAGGAAAAATCTAAGGAGTCGTCAACAAGAAGAAAATCAAGTTCAAGTAAAAGTACTGC
AGATCGCAATTTTTCCGATTTTACCTCTGAAAGTGAAGAAAATTGTGACGCAATGGACCG
ACGCCCACACCACCCCTATGATGCAAGGGGATACCCACCAAGAAGTCCGTTTCGAAGGCA
CAATGATGGCTGGGGGCGATATGACGGACCCCGTTCACCTCCTCATGGCTACCCACCCAG
ATATGTACAACGCCCTGCACTTCCTATTATTCGAAGATCTGTGACCCCTCCTCATTCCCC
TCGTTATCACTCTCCACCAAGCAGAAGAGAGGTCTACAATGAACCACGATTCATGGACCA
AGATCGTAGATTTGACAATCAATCGCCTCACTATGGTCACCCAATGCATTCACCTCGCCA
AAAATCCGGCTTCGGCAGTGGCAACCAGGACATTGATATGCGTCCCGAGACTGCTGCTCT
AAATCCTCATATAGATATGTTGCATAATACGTCACTCAACTCGAAACAAAACATCACTGC
TCATCCAAGAACAGATGAACGCAAATCAAGAGATAGATTGCCTCAAGATGAAAACCAAAG
AAAATCTGCAGCTCGGGACAGAAGTAGCTCTCGTTCGCACAGCCGAAGCAAGCATAGAAA
ACATAAAAAACATAAACGAAGCAGATCTTCACACCATCGGCATCATTCCAAACGATCCAG
GTCAAAAAGGCATTCAAGTTCGAATTCTTCAGCAGAAAGCACGGATAGCAACAACGATGA
TCAGCATTCTGATAGCTCTCAGACAACCAGATCATCGCAAAAGTCGAAAACAGAAGCACT
GACTTCAAATCTTATGACGGTGAAAGACTTGGCAGCTCAACTTAGCGAAAATCGTAAAAA
GCTTAAAGAAGAAGAAGAAAAAAGTCATCGGAAAAGAAAACACAAGCATCATAAACGAAG
AAAGGATAAGAAAAGAAAAACAAGTCGCAAACGAAAAGCTGAAAGCAGCGAGAGTCACAG
TGAAGTTGAGAATGAAATACATTCTGTTCCACTTCCATCCGAAGCTACTTTAACGCACAA
CGAGCAAAATACGAGCATCAACCAACAAGTTCTGGTTACTGTAAGCAGCAACGAGATAAT
GAATGGAAATCTCCTATCCAAACCCCACCTCTTCCAAACGATTTACTTGCAGTTGCGATG
GATGCGCACACCAAGGACGTTGACCATCGTGTGGCAATGCAACACGCACAGTCAATCAAG
TTTGAAGAAATGGCTTCGAAAGTTAATTCTTCAGATGAAATATCGTCAGCGCTCGAATCT
TCTGCATTTCCCAACAGATTGGTCGAACCGGATCCTCCAGCCGACCAATCAGCAACGAGC
GATCTACAACCAACCAATGATAAAAAACCTAAAAGAAGATGTAGTTCCAACAAAGAAAGG
ATTACATGATCTTCCTCTTCCTCCGATCCTTCCATCTTTATCAACAACTGATGATGAACC
TGCGCACACACCCCCACACAGCGATAAGGATCAAGTAAAGAAGAAAAGGCCAAAAATATG
CGGACCAAGAACAAGGGAAGTTGTTCAAACTGAGAATGACTGGGGTTCAATGTGTGTAGA
TGAATATGCATTCATATCTATCACTGGTGAAGGAACGTTTGGTCAAGTTTATAAAGCAAG
AGATAAACATACGGATGAAATATGTGCGCTTAAAAAGGTTCGATTGGACAACGAAAGGGA
AGGTTTTCCGATCACTGCTGTTCGGGAAATCAAAATTCTTCGTCAGTTACAACATCGGAA
CATTGTTTGTTTAAAAGATGTTTTGACTGACAAGTCAGATGCAACTGACTTCAGGAAGGA
AAAAGAATGTGCATTCTATCTTGTGTTTGAATACATGGACCATGACTTGATGGGGTTGCT
GGAATCGGGGATGGTTCATTTTAATGAAAACCACATCAAATCCTTTATGAAGCAGCTACT
GGATGGACTTAATCATTGTCATAAGAAAGGGTTTCTACACAGAGACATCAAATGTTCAAA
TATTCTGTTGAACAATAAAGGAGAAATCAAACTTGCAGATTTTGGATTAGCAAGGTTTTT
CAACAAAGATGAACAACGTCCGTACACAAATCGTGTGATCACGTTATGGTATCGACCGCC
TGAACTTTTACTTGGTGAGGAGATGTACACGCCGTCTATTGATATTTGGAGTTGTGGGTG
TATTTTGGCGGAGCTTTTCACCAAGAAACCATTGTTTCAAGCTGATCGTGAGCTTGCACA
GCTTGAATGTATAAGTCGTGTATGCGGTTCCCCATGCCCTGCAGTATGGCCTGATGTTAT
TAAACTTCCACATTTTCATACAATGAAACCAAAGAGACAACACAGAAGGAAATTGAGGGA
AGATTTCAGTTACTTACCCACGCTTGCTATTGATCTACTCGACCAAATGTTAACGTTGGA
TCCAAGCAAACGTTTCACGGCTGAAGAAGCGCTTAACTGCCCCTGGCTCAAAAATGTTGA
CACCAAAAATATGACGATGCCTGATTTTCCTCATTGGCAAGATTGCCACGAAATGTGGAG
CAAAAAGAGACGAAAAGAGATGAGAGAAACCGCTCGGTTGGCTGAGGGGAAATCGGCAAC
AAATGATAAAAAACCTGCAGTGAAAAAAGACACCGACCTACGTTCAAATAAAAGTAGCGA
CACATCCAACAACAGTAGCAGCCAGCCTGAAGCATCTTCGGCTGCTAGTGCTGACAACAA
GTCCAGTGAACAAGACGCATTGGTTCGACTGATGCAAGAAAAGCCAGATATGAACCTTGC
CCAACTTGCAAAAGCATGGAAGATGCCAATAGATGAAGAAAGCGTCAAACTGTTGTCATC
TGTTAATATTAAAGTCCTATTTGCTGCTCTTAGTAAAAAGAATGTAAAAGATACATCATC
AGAAGGCTTGACTGGTCTATTGGATCAGCTCCAGAAAACGCTTGGAAATGCTGTGAAAAA
TTCTGCCAAAGAAGAACCACCAACTCAACAAGTTAATGTTGCACCTCTACCATCACGACC
AGGATTGCAAGGTCCTTCATCTCATGAAACATCTGAAAGATCTGTCATAGCTTCAAGTCA
AGGAAAACATAAAAGAACAACAAAGGATGGTGAACGTAGGACAGAGGTGCAAAAGAATGA
TCATGGACATAAAACAAATGAAATACATGACAAGTTTAAAGTTGAAAATCATAATCCACA
CCACCATCATTCGTCCAGGGCAGGAAATTTGAATCAGAGTTCACATTCTTCCAATGAAAT
GAAACATCCTAGTGCCTCGTACCAATCTGCTGAAAGAAGGAGTGAAAAGAGAGATTCTCG
TTCTGACAAACAATTTTTCTACTCCAACGGCCGACATAATAGTTAAGGCATTCCATTTGT
GTACCGGTCAGTAATGCGTTCATGAAACGTGATGAGGCCTTGCTAGTAATCTTAATTTGT
ATGCCAGTTCTTTCTCAATTTGTGTTAGAACAAATACAACTTTCGCCAAC
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[668-972] 1.48E-97 |
| SMART |
Prot_kinase_dom (IPR000719) - T[674-968] 1.7E-95 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[674-968] 44.145 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[676-968] 3.3E-74 |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[803-815] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 46.154 % | 276 | 2.38E-83 |
| CDK13_HUMAN | 58.498 % | 624 | 0 |
| CDK12_HUMAN | 59.768 % | 632 | 0 |