- Transcript 'KH2012:KH.C9.315.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.315.v2.A.SL3-1
Possible name(s)
CDK12; CDK13; CDK9
Gene model
Location
KhC9 [3,639,743 / 3,652,762]
Amino acid sequence
Length: 1,150
>KH.C9.315.v2.A.SL3-1
KEFRFNSNHTNTSKQRKEKSKESSTRRKSSSSKSTADRNFSDFTSESEENCDAMDRRPHH
PYDARGYPPRSPFRRHNDGWGRYDGPRSPPHGYPPRYVQRPALPIIRRSVTPPHSPRYHS
PPSRREVYNEPRFMDQDRRFDNQSPHYGHPMHSPRQKSGFGSGNQDIDMRPETAALNPHI
DMLHNTSLNSKQNITAHPRTDERKSRDRLPQDENQRKSAARDRSSSRSHSRSKHRKHKKH
KRSRSSHHRHHSKRSRSKRHSSSNSSAESTDSNNDDQHSDSSQTTRSSQKSKTEALTSNL
MTVKDLAAQLSENRKKLKEEEEKSHRKRKHKHHKRRKDKKRKTSRKRKAESSESHSEVEN
EIHSVPLPSEATLTHNEQNTSINQQVLVTVSSNEIMNGNLLSKPHLFQTIYLQLRWMRTP
RTLTIVWQCNTHSQSSLKKWLRKLILQMKYRQRSNLLHFPTDWSNRILQPTNQQRAIYNQ
PMIKNLKEDVVPTKKGLHDLPLPPILPSLSTTDDEPAHTPPHSDKDQVKKKRPKICGPRT
REVVQTENDWGSMCVDEYAFISITGEGTFGQVYKARDKHTDEICALKKVRLDNEREGFPI
TAVREIKILRQLQHRNIVCLKDVLTDKSDATDFRKEKECAFYLVFEYMDHDLMGLLESGM
VHFNENHIKSFMKQLLDGLNHCHKKGFLHRDIKCSNILLNNKGEIKLADFGLARFFNKDE
QRPYTNRVITLWYRPPELLLGEEMYTPSIDIWSCGCILAELFTKKPLFQADRELAQLECI
SRVCGSPCPAVWPDVIKLPHFHTMKPKRQHRRKLREDFSYLPTLAIDLLDQMLTLDPSKR
FTAEEALNCPWLKNVDTKNMTMPDFPHWQDCHEMWSKKRRKEMRETARLAEGKSATNDKK
PAVKKDTDLRSNKSSDTSNNSSSQPEASSAASADNKSSEQDALVRLMQEKPDMNLAQLAK
AWKMPIDEESVKLLSSVNIKVLFAALSKKNVKDTSSEGLTGLLDQLQKTLGNAVKNSAKE
EPPTQQVNVAPLPSRPGLQGPSSHETSERSVIASSQGKHKRTTKDGERRTEVQKNDHGHK
TNEIHDKFKVENHNPHHHHSSRAGNLNQSSHSSNEMKHPSASYQSAERRSEKRDSRSDKQ
FFYSNGRHNS
Nucleotide sequence
Length: 3,577
>KH2012:KH.C9.315.v2.A.SL3-1
AAAGAGTTTCGTTTTAATTCAAACCACACAAACACATCCAAACAAAGAAAGGAAAAATCT
AAGGAGTCGTCAACAAGAAGAAAATCAAGTTCAAGTAAAAGTACTGCAGATCGCAATTTT
TCCGATTTTACCTCTGAAAGTGAAGAAAATTGTGACGCAATGGACCGACGCCCACACCAC
CCCTATGATGCAAGGGGATACCCACCAAGAAGTCCGTTTCGAAGGCACAATGATGGCTGG
GGGCGATATGACGGACCCCGTTCACCTCCTCATGGCTACCCACCCAGATATGTACAACGC
CCTGCACTTCCTATTATTCGAAGATCTGTGACCCCTCCTCATTCCCCTCGTTATCACTCT
CCACCAAGCAGAAGAGAGGTCTACAATGAACCACGATTCATGGACCAAGATCGTAGATTT
GACAATCAATCGCCTCACTATGGTCACCCAATGCATTCACCTCGCCAAAAATCCGGCTTC
GGCAGTGGCAACCAGGACATTGATATGCGTCCCGAGACTGCTGCTCTAAATCCTCATATA
GATATGTTGCATAATACGTCACTCAACTCGAAACAAAACATCACTGCTCATCCAAGAACA
GATGAACGCAAATCAAGAGATAGATTGCCTCAAGATGAAAACCAAAGAAAATCTGCAGCT
CGGGACAGAAGTAGCTCTCGTTCGCACAGCCGAAGCAAGCATAGAAAACATAAAAAACAT
AAACGAAGCAGATCTTCACACCATCGGCATCATTCCAAACGATCCAGGTCAAAAAGGCAT
TCAAGTTCGAATTCTTCAGCAGAAAGCACGGATAGCAACAACGATGATCAGCATTCTGAT
AGCTCTCAGACAACCAGATCATCGCAAAAGTCGAAAACAGAAGCACTGACTTCAAATCTT
ATGACGGTGAAAGACTTGGCAGCTCAACTTAGCGAAAATCGTAAAAAGCTTAAAGAAGAA
GAAGAAAAAAGTCATCGGAAAAGAAAACACAAGCATCATAAACGAAGAAAGGATAAGAAA
AGAAAAACAAGTCGCAAACGAAAAGCTGAAAGCAGCGAGAGTCACAGTGAAGTTGAGAAT
GAAATACATTCTGTTCCACTTCCATCCGAAGCTACTTTAACGCACAACGAGCAAAATACG
AGCATCAACCAACAAGTTCTGGTTACTGTAAGCAGCAACGAGATAATGAATGGAAATCTC
CTATCCAAACCCCACCTCTTCCAAACGATTTACTTGCAGTTGCGATGGATGCGCACACCA
AGGACGTTGACCATCGTGTGGCAATGCAACACGCACAGTCAATCAAGTTTGAAGAAATGG
CTTCGAAAGTTAATTCTTCAGATGAAATATCGTCAGCGCTCGAATCTTCTGCATTTCCCA
ACAGATTGGTCGAACCGGATCCTCCAGCCGACCAATCAGCAACGAGCGATCTACAACCAA
CCAATGATAAAAAACCTAAAAGAAGATGTAGTTCCAACAAAGAAAGGATTACATGATCTT
CCTCTTCCTCCGATCCTTCCATCTTTATCAACAACTGATGATGAACCTGCGCACACACCC
CCACACAGCGATAAGGATCAAGTAAAGAAGAAAAGGCCAAAAATATGCGGACCAAGAACA
AGGGAAGTTGTTCAAACTGAGAATGACTGGGGTTCAATGTGTGTAGATGAATATGCATTC
ATATCTATCACTGGTGAAGGAACGTTTGGTCAAGTTTATAAAGCAAGAGATAAACATACG
GATGAAATATGTGCGCTTAAAAAGGTTCGATTGGACAACGAAAGGGAAGGTTTTCCGATC
ACTGCTGTTCGGGAAATCAAAATTCTTCGTCAGTTACAACATCGGAACATTGTTTGTTTA
AAAGATGTTTTGACTGACAAGTCAGATGCAACTGACTTCAGGAAGGAAAAAGAATGTGCA
TTCTATCTTGTGTTTGAATACATGGACCATGACTTGATGGGGTTGCTGGAATCGGGGATG
GTTCATTTTAATGAAAACCACATCAAATCCTTTATGAAGCAGCTACTGGATGGACTTAAT
CATTGTCATAAGAAAGGGTTTCTACACAGAGACATCAAATGTTCAAATATTCTGTTGAAC
AATAAAGGAGAAATCAAACTTGCAGATTTTGGATTAGCAAGGTTTTTCAACAAAGATGAA
CAACGTCCGTACACAAATCGTGTGATCACGTTATGGTATCGACCGCCTGAACTTTTACTT
GGTGAGGAGATGTACACGCCGTCTATTGATATTTGGAGTTGTGGGTGTATTTTGGCGGAG
CTTTTCACCAAGAAACCATTGTTTCAAGCTGATCGTGAGCTTGCACAGCTTGAATGTATA
AGTCGTGTATGCGGTTCCCCATGCCCTGCAGTATGGCCTGATGTTATTAAACTTCCACAT
TTTCATACAATGAAACCAAAGAGACAACACAGAAGGAAATTGAGGGAAGATTTCAGTTAC
TTACCCACGCTTGCTATTGATCTACTCGACCAAATGTTAACGTTGGATCCAAGCAAACGT
TTCACGGCTGAAGAAGCGCTTAACTGCCCCTGGCTCAAAAATGTTGACACCAAAAATATG
ACGATGCCTGATTTTCCTCATTGGCAAGATTGCCACGAAATGTGGAGCAAAAAGAGACGA
AAAGAGATGAGAGAAACCGCTCGGTTGGCTGAGGGGAAATCGGCAACAAATGATAAAAAA
CCTGCAGTGAAAAAAGACACCGACCTACGTTCAAATAAAAGTAGCGACACATCCAACAAC
AGTAGCAGCCAGCCTGAAGCATCTTCGGCTGCTAGTGCTGACAACAAGTCCAGTGAACAA
GACGCATTGGTTCGACTGATGCAAGAAAAGCCAGATATGAACCTTGCCCAACTTGCAAAA
GCATGGAAGATGCCAATAGATGAAGAAAGCGTCAAACTGTTGTCATCTGTTAATATTAAA
GTCCTATTTGCTGCTCTTAGTAAAAAGAATGTAAAAGATACATCATCAGAAGGCTTGACT
GGTCTATTGGATCAGCTCCAGAAAACGCTTGGAAATGCTGTGAAAAATTCTGCCAAAGAA
GAACCACCAACTCAACAAGTTAATGTTGCACCTCTACCATCACGACCAGGATTGCAAGGT
CCTTCATCTCATGAAACATCTGAAAGATCTGTCATAGCTTCAAGTCAAGGAAAACATAAA
AGAACAACAAAGGATGGTGAACGTAGGACAGAGGTGCAAAAGAATGATCATGGACATAAA
ACAAATGAAATACATGACAAGTTTAAAGTTGAAAATCATAATCCACACCACCATCATTCG
TCCAGGGCAGGAAATTTGAATCAGAGTTCACATTCTTCCAATGAAATGAAACATCCTAGT
GCCTCGTACCAATCTGCTGAAAGAAGGAGTGAAAAGAGAGATTCTCGTTCTGACAAACAA
TTTTTCTACTCCAACGGCCGACATAATAGTTAAGGCATTCCATTTGTGTACCGGTCAGTA
ATGCGTTCATGAAACGTGATGAGGCCTTGCTAGTAATCTTAATTTGTATGCCAGTTCTTT
CTCAATTTGTGTTAGAACAAATACAACTTTCGCCAAC
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[552-856] 1.27E-97 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[558-852] 44.145 |
| SMART |
Prot_kinase_dom (IPR000719) - T[558-852] 1.7E-95 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[560-852] 2.8E-74 |
| ProSitePatterns |
Ser/Thr_kinase_AS (IPR008271) - T[687-699] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDK9_HUMAN | 46.154 % | 276 | 1.06E-83 |
| CDK13_HUMAN | 58.498 % | 622 | 0 |
| CDK12_HUMAN | 60.039 % | 630 | 0 |