- Clone 'cilv030a14' >
- Transcript 'KH2012:KH.C8.273.v2....' >
- Clone 'ciad061p13' >
- Transcript 'KH2012:KH.C9.606.v1....' >
- Transcript 'KH2012:KH.C9.335.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.335.v2.A.SL2-1
Possible name(s)
PUF60; RBM17
Gene model
Location
KhC9 [1,326,272 / 1,332,031]
Amino acid sequence
Length: 353
>KH.C9.335.v2.A.SL2-1
PVCILQARKATLTKAKNEKGRLSSSVAPVVDFTKLRQDDTSLEDMRDAKPSVFLGGEILE
KFADEYDPLHPNDYDHMTKKDRERKENQQDAGRDRELEERRKRRAERHAKKGPDDELPRP
MGFGDEVDFEREKKKRVMGNKVAIAPPTVLIEADKQSLPTDRSMSPPLPSAVGTQFARNL
AGSVAHKIMAKYGFKEGLGLGKDNKGMSHALQIEKTSKRGGKIISSEQIEQQLEEEYKKE
QQEKKSVTDLLKNPTKVICLRNMVGPGEVDDDLEAETKEECSKYGSVNKCLIFEMHGVTE
DEAIRIFIEFDRMESAIKSLVDMNGRFFGGRTVKASFYDVEKFKSFQLSDPIT
Nucleotide sequence
Length: 2,144
>KH2012:KH.C9.335.v2.A.SL2-1
CAAATGCAATTAACCTGTATGCATCCTGCAGGCCCGCAAAGCAACACTGACAAAAGCAAA
AAATGAAAAAGGAAGATTGTCATCTTCTGTTGCCCCAGTGGTTGACTTCACTAAACTAAG
GCAGGATGATACTTCATTGGAGGATATGAGAGATGCAAAACCGAGTGTTTTTCTTGGCGG
TGAAATACTTGAAAAGTTCGCTGACGAATATGATCCGTTACACCCCAACGATTATGATCA
CATGACCAAAAAGGACAGAGAGCGGAAGGAAAATCAGCAAGATGCTGGGAGGGATCGTGA
GCTTGAAGAGAGGAGGAAGAGAAGAGCTGAGAGACACGCTAAGAAAGGTCCAGATGATGA
ACTTCCTCGTCCCATGGGATTTGGAGATGAAGTTGATTTTGAACGAGAGAAAAAGAAACG
AGTTATGGGAAACAAAGTAGCGATCGCACCGCCCACTGTTCTTATTGAAGCCGACAAGCA
ATCTCTTCCAACAGATCGATCAATGTCTCCCCCACTGCCAAGCGCTGTTGGAACTCAGTT
TGCCAGGAATCTCGCTGGATCTGTTGCGCATAAAATCATGGCGAAGTATGGATTTAAGGA
AGGGCTGGGTCTCGGTAAAGACAACAAGGGAATGAGTCATGCACTTCAGATCGAGAAGAC
GAGCAAAAGAGGAGGAAAGATCATCTCAAGCGAACAGATTGAACAACAACTTGAGGAAGA
ATATAAAAAAGAACAACAAGAAAAGAAATCTGTGACGGATCTGCTCAAGAATCCAACTAA
AGTTATTTGTTTAAGGAACATGGTTGGTCCTGGTGAGGTCGACGATGATCTTGAAGCGGA
AACAAAAGAAGAATGTTCCAAATATGGAAGTGTTAATAAGTGTCTTATATTTGAAATGCA
TGGCGTAACAGAAGACGAAGCGATCCGAATATTTATCGAGTTCGACCGAATGGAATCCGC
GATTAAATCATTGGTTGATATGAATGGACGTTTCTTTGGCGGCCGAACCGTCAAAGCTTC
GTTTTATGACGTCGAAAAATTTAAATCATTTCAGCTATCAGACCCAATTACGTGATGTGT
TGCGTCATAATAGACATTGATGTAATCGTCTATGGGACAATGACACGATAATACGTTATA
TTATATGTATTGTGTTTATTAGCACTGGCGTATTGGACCAAGTGAAAACGAATGATCTCG
TTTTAAAACCCGTATTCAATCATTATCGGATTAGAATACAAACAACGTTATTTTAATATC
TTTTTGAATGTAGTGTGTAAGATTTACTAAACAAACGGTAAATCGTGGCAAATTATATAT
AGTACTGTGGCCTGTGGGGTAAGATGGCCCTGGGATACTGTTACCTCCTAAATCACTCAT
TTCCTAATTCTGTTACTGTATAGTTAACAACGATTTCAAGAGTCGCGGGCTACGGTAAAA
TAGTTCTTTAAAAATTCCTTGTATGACACCAAATGGTACGAGAAGAGAATGAACAAATGA
ATTATATTACCCCACACTGTTGTACATACGCTAGTAGCTATCGGCATGAATTATTTCAAT
GTAGGTCGTTTTGGTGTCTTCCACAAAACGTCTAATATATGCGAGTATGTTTTCACCATG
CGGGCGACTGGCTAGACAGGGATTCGAACTCGCAACCGTCTAACTATACAGCGACTATGC
GTTTCTAATGTTAAACTGACCTATAACGAATCAGACGCGGGTACGTTATTTACATGCAGC
TAATTGCGCACGTCTATTATATACGAATAATGCATTAGATCAATATGTGCAAAGTAAGCT
GTCATAGTCTGTACAGTGACAAGTATAATAAGATGATATATTTTTTACCCTTATATAAAC
GAAAGCAAGATATTGTAAAGTCGTATTTTGGAACGAGTGTCAAGATGCTGTATATATATA
CAGTTCTATATTGGCCGTGGTTTAAATATGAGAAACCATATAGAAAAGGTTTTGGACCAA
TGCTAGAATAATTTGTGCAATACATACGCCATATGTGGTTGCGTCGTTAGGTTAACAGTA
AATAGCAACAATCTTATCTCAAATCTAACCGCTTGAAATGAGTTTTATGCATTATACATA
TCGTGAACTTAAATCGATGAAAAATAAAGTTTTTTGTGCATTTT
| PIRSF |
Splicing_factor_SPF45 (IPR016967) - T[4-353] 3.7E-89 |
| SMART |
G_patch_dom (IPR000467) - T[179-225] 2.9E-9 |
| ProSiteProfiles |
G_patch_dom (IPR000467) - T[181-227] 12.083 |
| Pfam |
G_patch_dom (IPR000467) - T[182-222] 7.5E-11 |
| CDD |
SPF45_RRM (IPR034653) - T[254-348] 2.03201E-61 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[255-339] 6.8E-27 |
| SMART |
RRM_dom_euk (IPR003954) - T[257-336] 1.2E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[260-343] 8.28E-15 |
| Pfam |
RRM_dom (IPR000504) - T[278-334] 2.8E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PUF60_HUMAN | 45.631 % | 90.5 | 6.22E-20 |
| SPF45_HUMAN | 46.494 % | 298 | 7.72E-99 |