- Transcript 'KH2012:KH.C9.358.v1....' >
- Transcript 'KH2012:KH.C9.358.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.358.v1.A.nonSL2-1
Possible name(s)
AC012314.17; RPS9
Gene model
Location
KhC9 [955,035 / 957,237]
Amino acid sequence
Length: 193
>KH.C9.358.v1.A.nonSL2-1
SKMPHARRLVYRKTYVTPRRPFEKARLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAAR
DLLTLDEKNTRRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLG
LAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNA
KKGSNTNEEEDED
Nucleotide sequence
Length: 679
>KH2012:KH.C9.358.v1.A.nonSL2-1
TTCTTTTCTGATAGCAAACTGCGTTAAAGCAAAATGCCGCACGCAAGGAGGTTAGTTTAC
CGAAAGACTTACGTCACCCCAAGACGACCCTTCGAGAAGGCTCGTTTGGACCAAGAATTG
AAACTCATCGGAGAATATGGTCTTCGTAACAAGCGGGAGGTATGGAGAGTAAAGTACACA
CTTGCCAAGATTCGCAAAGCTGCTCGTGATCTCTTGACCTTAGATGAGAAGAACACAAGA
CGACTTTTCGAGGGTAATGCGTTGCTACGACGATTGGTCCGCATCGGTGTCTTGGATGAA
ACGAAGATGAAACTCGATTACGTGCTCGGTTTGAAAGTTGAGGACTTTCTTGAGAGACGA
CTCCAAACCCAAGTATTTAAACTCGGGCTTGCTAAGTCCATTCATCATGCGCGTGTGCTG
ATCAGGCAACGTCACATTCGTGTTCGTAAGCAAGTGGTGAACATCCCATCTTTCATTGTT
CGACTTGATTCGCAGAAGCATATTGACTTCTCCCTTCGCTCACCATATGGTGGTGGCAGA
CCTGGACGTGTCAAGCGAAAGAACGCTAAGAAGGGATCCAACACCAACGAGGAGGAGGAT
GAAGATTAGATGAGATCTCTATGTCCGAGAAACCCTTCATATTAGGGTGTTTGGAATAAA
AGTTACAAAATTGCGTACA
| TIGRFAM |
Ribosomal_S4/S9_euk/arc (IPR005710) - T[3-167] 2.9E-71 |
| SMART |
Ribosomal_S4/S9_N (IPR001912) - T[8-109] 2.5E-19 |
| PANTHER |
Ribosomal_S4/S9 (IPR022801) - T[10-189] 9.4E-93 |
| Pfam |
Ribosomal_S4/S9_N (IPR001912) - T[21-65] 7.8E-6 |
| ProSitePatterns |
Ribosomal_S4_CS (IPR018079) - T[108-132] . |
| Pfam |
S4_RNA-bd (IPR002942) - T[110-153] 4.3E-11 |
| SMART |
S4_RNA-bd (IPR002942) - T[110-181] 0.0011 |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[110-181] 10.033 |
| CDD |
S4_RNA-bd (IPR002942) - T[110-152] 2.51699E-7 |
| Gene3D |
S4_RNA-bd_sf (IPR036986) - T[111-186] 7.7E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS9_HUMAN | 89.175 % | 330 | 2.23E-117 |