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- Transcript 'KH2012:KH.C9.358.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.358.v2.A.nonSL7-1
Possible name(s)
AC012314.17; RPS9
Gene model
Location
KhC9 [955,263 / 957,237]
Amino acid sequence
Length: 171
>KH.C9.358.v2.A.nonSL7-1
EKARLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARDLLTLDEKNTRRLFEGNALLRR
LVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQ
VVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGSNTNEEEDED
Nucleotide sequence
Length: 586
>KH2012:KH.C9.358.v2.A.nonSL7-1
GAGAAGGCTCGTTTGGACCAAGAATTGAAACTCATCGGAGAATATGGTCTTCGTAACAAG
CGGGAGGTATGGAGAGTAAAGTACACACTTGCCAAGATTCGCAAAGCTGCTCGTGATCTC
TTGACCTTAGATGAGAAGAACACAAGACGACTTTTCGAGGGTAATGCGTTGCTACGACGA
TTGGTCCGCATCGGTGTCTTGGATGAAACGAAGATGAAACTCGATTACGTGCTCGGTTTG
AAAGTTGAGGACTTTCTTGAGAGACGACTCCAAACCCAAGTATTTAAACTCGGGCTTGCT
AAGTCCATTCATCATGCGCGTGTGCTGATCAGGCAACGTCACATTCGTGTTCGTAAGCAA
GTGGTGAACATCCCATCTTTCATTGTTCGACTTGATTCGCAGAAGCATATTGACTTCTCC
CTTCGCTCACCATATGGTGGTGGCAGACCTGGACGTGTCAAGCGAAAGAACGCTAAGAAG
GGATCCAACACCAACGAGGAGGAGGATGAAGATTAGATGAGATCTCTATGTCCGAGAAAC
CCTTCATATTAGGGTGTTTGGAATAAAAGTTACAAAATTGCGTACA
| PANTHER |
Ribosomal_S4/S9 (IPR022801) - T[1-167] 1.1E-86 |
| TIGRFAM |
Ribosomal_S4/S9_euk/arc (IPR005710) - T[1-145] 6.9E-64 |
| SMART |
Ribosomal_S4/S9_N (IPR001912) - T[2-87] 5.6E-9 |
| Pfam |
Ribosomal_S4/S9_N (IPR001912) - T[3-43] 4.3E-5 |
| ProSitePatterns |
Ribosomal_S4_CS (IPR018079) - T[86-110] . |
| Pfam |
S4_RNA-bd (IPR002942) - T[88-131] 3.5E-11 |
| CDD |
S4_RNA-bd (IPR002942) - T[88-130] 2.87431E-7 |
| SMART |
S4_RNA-bd (IPR002942) - T[88-159] 0.0011 |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[88-159] 10.033 |
| Gene3D |
S4_RNA-bd_sf (IPR036986) - T[89-165] 6.0E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS9_HUMAN | 90.23 % | 298 | 3.87E-105 |