- Transcript 'KH2012:KH.C9.358.v1....' >
- Transcript 'KH2012:KH.C9.358.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.358.v2.A.SL1-1
Possible name(s)
AC012314.17; RPS9
Gene model
Location
KhC9 [955,199 / 957,237]
Amino acid sequence
Length: 192
>KH.C9.358.v2.A.SL1-1
KMPHARRLVYRKTYVTPRRPFEKARLDQELKLIGEYGLRNKREVWRVKYTLAKIRKAARD
LLTLDEKNTRRLFEGNALLRRLVRIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGL
AKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAK
KGSNTNEEEDED
Nucleotide sequence
Length: 650
>KH2012:KH.C9.358.v2.A.SL1-1
CAAAATGCCGCACGCAAGGAGGTTAGTTTACCGAAAGACTTACGTCACCCCAAGACGACC
CTTCGAGAAGGCTCGTTTGGACCAAGAATTGAAACTCATCGGAGAATATGGTCTTCGTAA
CAAGCGGGAGGTATGGAGAGTAAAGTACACACTTGCCAAGATTCGCAAAGCTGCTCGTGA
TCTCTTGACCTTAGATGAGAAGAACACAAGACGACTTTTCGAGGGTAATGCGTTGCTACG
ACGATTGGTCCGCATCGGTGTCTTGGATGAAACGAAGATGAAACTCGATTACGTGCTCGG
TTTGAAAGTTGAGGACTTTCTTGAGAGACGACTCCAAACCCAAGTATTTAAACTCGGGCT
TGCTAAGTCCATTCATCATGCGCGTGTGCTGATCAGGCAACGTCACATTCGTGTTCGTAA
GCAAGTGGTGAACATCCCATCTTTCATTGTTCGACTTGATTCGCAGAAGCATATTGACTT
CTCCCTTCGCTCACCATATGGTGGTGGCAGACCTGGACGTGTCAAGCGAAAGAACGCTAA
GAAGGGATCCAACACCAACGAGGAGGAGGATGAAGATTAGATGAGATCTCTATGTCCGAG
AAACCCTTCATATTAGGGTGTTTGGAATAAAAGTTACAAAATTGCGTACA
| TIGRFAM |
Ribosomal_S4/S9_euk/arc (IPR005710) - T[2-166] 2.8E-71 |
| SMART |
Ribosomal_S4/S9_N (IPR001912) - T[7-108] 2.5E-19 |
| PANTHER |
Ribosomal_S4/S9 (IPR022801) - T[9-188] 9.3E-93 |
| Pfam |
Ribosomal_S4/S9_N (IPR001912) - T[20-64] 7.7E-6 |
| ProSitePatterns |
Ribosomal_S4_CS (IPR018079) - T[107-131] . |
| Pfam |
S4_RNA-bd (IPR002942) - T[109-152] 4.3E-11 |
| SMART |
S4_RNA-bd (IPR002942) - T[109-180] 0.0011 |
| CDD |
S4_RNA-bd (IPR002942) - T[109-151] 2.78272E-7 |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[109-180] 10.033 |
| Gene3D |
S4_RNA-bd_sf (IPR036986) - T[110-185] 7.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS9_HUMAN | 89.175 % | 330 | 2.67E-117 |