- Transcript 'KH2012:KH.C2.104.v2....' >
- Transcript 'KH2012:KH.C6.283.v2....' >
- Transcript 'KH2012:KH.C12.153.v1...' >
- Transcript 'KH2012:KH.C3.59.v1.A...' >
- Transcript 'KH2012:KH.C9.38.v10....'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v10.A.SL2-3
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,591,753 / 5,602,037]
Amino acid sequence
Length: 687
>KH.C9.38.v10.A.SL2-3
SKQLTEAKDNHSTNSPGPMGDAPNKRPLEDGEEPGPKKLATPQTSAANSEQIEFDNLGMQ
QNPDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIPGTKERPCTLSGTQE
QIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKG
GETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDNAVSAVHQMMANRDQQIAQ
QKMERDGGGGGGQGGMDPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQ
FKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDAGNRGGSGGGGGGSGGGHPG
GMGGFGQWEGPNMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQR
NPPPGSDLNYKTFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFG
PPPHQQGGYGGLPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQ
NGADPTKPVADSSNAAAWQTYLQMYGAQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYLK
QNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAWAEY
YRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,329
>KH2012:KH.C9.38.v10.A.SL2-3
GGGATTCTATTAGCACCAGATGCTGTAGCAGGTCTGACATAATGTTTATTGTTTAATCCA
AGCAGCTTACAGAAGCCAAGGACAATCACTCCACTAATTCCCCTGGGCCTATGGGAGACG
CCCCTAACAAGAGACCCTTAGAAGATGGTGAAGAACCTGGCCCAAAGAAACTAGCTACTC
CTCAGACGTCTGCTGCAAACAGTGAACAAATAGAATTCGATAACCTTGGAATGCAACAAA
ATCCAGATATAATGTCAGATACGATCAGATTGCCAGATGATCTTGTGGGATTAATTATTG
GTAGGGGAGGGGAAAACATAATGCGAATGCAACGTGAAACTGGATGTAGGATTCAAATCA
CGCAAAGTATTCCGGGCACCAAAGAAAGACCATGCACACTGTCGGGCACTCAAGAACAAA
TAGAAGTGTGCAGAAATATGTTGAATGAAATAATCTCCCGTTCACAAGCGGGCACACTGG
GCAGCAACTTTAATCTTTCACAAGGTGGCTTGGGGGGTATGGGGGACGGAGGAATGGAGA
AATCTATCGAGATCGCTGTCCCACCCGACAAGTGTGGTCTTATAATTGGAAAAGGTGGAG
AAACAATTAAAATGTTGCAGCAAAGTTTGGGGGTTAAGATGTTGCTGATTCAGGATTCTA
CTGATAACATCGGTCAGAGCAAACCACTGAGGATAACTGGTCCACAACTTAATGTTGATA
ATGCAGTGAGTGCAGTTCACCAGATGATGGCAAACCGTGACCAACAGATTGCTCAGCAGA
AGATGGAGAGAGATGGAGGCGGCGGTGGTGGACAAGGGGGCATGGATCCCAATATGTTTG
GAGATGATGTGAACAAAACCATCATCCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTG
GGAAAGGCGGGGACATGATCAACCAAATCCAAAACGTCACTGGAACCAGAGTTCAGTTCA
AACCAGAGGATCCTACTTTACCTGAACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAG
TAGATGCTGCTATTAGAAGGATCCATGAGATTATACAGAACGTACAAGAACGTGATGCAG
GTAACAGAGGAGGCAGTGGTGGTGGAGGAGGTGGCAGTGGGGGAGGTCATCCTGGTGGAA
TGGGAGGATTTGGCCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAA
TGGCATCTGAGGAACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGGTG
GAGACACCATTAAACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAATC
CTCCACCTGGTTCAGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACAAA
TTAAAATGGCGCGCCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCA
ATGGACAGATGCACGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCCAC
CACCACACCAGCAGGGAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAA
GCCATAACCCATTGCAGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAAC
CATGGGGTAATCAATTTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACG
GTGCTGATCCAACGAAACCTGTGGCTGATTCTAGCAATGCTGCAGCTTGGCAGACGTACC
TTCAAATGTATGGAGCACAAGCACAAGCATACCAACAACCTGCTGCTGCTGCTGCAGTTT
CCGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGA
ATGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTG
CTGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTG
CTGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACA
GACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGAC
AAGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAG
TTTCAGGACTTCCATGGTTGAGGAAATATCCCTCCGCATCAAAATTGTGGAGAAAAACCA
TCTGGGACACAGATCCGTAAACTGGCCAACTGTTTTTTGCTCCGTTGCTTGTGTTTGTAT
GTTTTATGTAGATGTAATAAAATCACGCAATCGTAGAGTCGATGTAACA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[55-139] 1.7E-23 - T[162-239] 4.8E-20 - T[259-363] 2.4E-25 - T[385-453] 2.5E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[58-135] 1.46E-18 - T[160-250] 2.34E-15 - T[260-339] 3.21E-18 - T[379-454] 7.31E-16 |
| SMART |
KH_dom (IPR004087) - T[64-134] 5.1E-16 - T[160-232] 1.9E-14 - T[264-334] 1.6E-15 - T[381-454] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[69-131] 3.5E-17 - T[164-228] 9.1E-13 - T[268-331] 5.2E-15 - T[387-451] 2.6E-14 |
| Pfam |
FUBP_C (IPR015096) - T[646-663] 1.6E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 42.191 % | 290 | 1.17E-88 |
| FUBP2_HUMAN | 35.704 % | 286 | 1.36E-86 |
| FUBP3_HUMAN | 38.757 % | 301 | 1.27E-93 |