- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C5.109.v3....' >
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- Transcript 'KH2012:KH.C9.38.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v1.A.SL1-3
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,603 / 5,602,037]
Amino acid sequence
Length: 661
>KH.C9.38.v1.A.SL1-3
TLSFLEEPGPKKLATPQTSAANSEQIEFDNLGMQQNPDIMSDTIRLPDDLVGLIIGRGGE
NIMRMQRETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFN
LSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIG
QSKPLRITGPQLNVDNAVSAVHQMMANRDQQIAQQKMERDGGGGGGQGGMDPNMFGDDVN
KTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAI
RRIHEIIQNVQERDAGNRGGSGGGGGGSGGGHPGGMGGFGQWEGPNMGRGGRGMGMASEE
HLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQIKMAR
QLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQQGGYGGLPPAAGYGHPSHNPL
QGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPTKPVADSSNAAAWQTYLQMYG
AQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAAAAIQQ
QQVAAPAAAAPAASAAVQPATTQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQAPAP
T
Nucleotide sequence
Length: 2,224
>KH2012:KH.C9.38.v1.A.SL1-3
AGGTCTTGTGCATTAGGGTTTGAATTTAAACTTTGTCATTTTTAGAAGAACCTGGCCCAA
AGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAGTGAACAAATAGAATTCGATAACC
TTGGAATGCAACAAAATCCAGATATAATGTCAGATACGATCAGATTGCCAGATGATCTTG
TGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGCAACGTGAAACTGGAT
GTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGACCATGCACACTGTCGG
GCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAATAATCTCCCGTTCAC
AAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCTTGGGGGGTATGGGGG
ACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACAAGTGTGGTCTTATAA
TTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGGGGGTTAAGATGTTGC
TGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGAGGATAACTGGTCCAC
AACTTAATGTTGATAATGCAGTGAGTGCAGTTCACCAGATGATGGCAAACCGTGACCAAC
AGATTGCTCAGCAGAAGATGGAGAGAGATGGAGGCGGCGGTGGTGGACAAGGGGGCATGG
ATCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCCCAGTTCCCAAAGCTGCCG
TTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAATCCAAAACGTCACTGGAA
CCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAACGTATGTGCAGCGTGATGG
GACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATGAGATTATACAGAACGTAC
AAGAACGTGATGCAGGTAACAGAGGAGGCAGTGGTGGTGGAGGAGGTGGCAGTGGGGGAG
GTCATCCTGGTGGAATGGGAGGATTTGGCCAGTGGGAAGGACCAAACATGGGTCGGGGTG
GTAGAGGCATGGGAATGGCATCTGAGGAACACTTGGTGCCTGCTAATAAAACTGGACTGG
TAATTGGAAAAGGTGGAGACACCATTAAACAAATCAACATGCAGTCTGGTGCACATGCTG
AGATACAGAGAAATCCTCCACCTGGTTCAGATCTCAATTACAAAACTTTCATCATCAAAG
GCACTCCTGAACAAATTAAAATGGCGCGCCAGTTGATCCAGGAGAAAGTTGACGCTGGTC
CAGGTGGTTCGAGCAATGGACAGATGCACGGTGGACACATGGGAGGCCAACCACCTATGA
GTAACTTTGGTCCACCACCACACCAGCAGGGAGGGTATGGTGGTCTCCCACCAGCAGCAG
GATATGGACATCCAAGCCATAACCCATTGCAGGGGCCACCTCAGGCTCCCCAAGCACCAC
AGTCATACCAGCAACCATGGGGTAATCAATTTCAGCAATGGAATTCACCAACTGTGTCCG
CTCCACAGCAAAACGGTGCTGATCCAACGAAACCTGTGGCTGATTCTAGCAATGCTGCAG
CTTGGCAGACGTACCTTCAAATGTATGGAGCACAAGCACAAGCATACCAACAACCTGCTG
CTGCTGCTGCAGTTTCCGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATG
AATACTTGAAACAGAATGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCG
CTCCAGCCGCTGCTGCTGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCAC
CGGCTGCCTCTGCTGCTGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCAT
GGGCCGAGTATTACAGACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTG
CTGCCGCTGCTGGACAAGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCA
TTGTAAATATCCAAGTTTCAGGACTTCCATGGTTGAGGAAATATCCCTCCGCATCAAAAT
TGTGGAGAAAAACCATCTGGGACACAGATCCGTAAACTGGCCAACTGTTTTTTGCTCCGT
TGCTTGTGTTTGTATGTTTTATGTAGATGTAATAAAATCACGCAATCGTAGAGTCGATGT
AACA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[29-113] 1.6E-23 - T[136-213] 4.5E-20 - T[233-337] 2.3E-25 - T[359-427] 2.4E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[32-109] 1.39E-18 - T[134-224] 2.19E-15 - T[233-313] 3.07E-18 - T[353-428] 6.87E-16 |
| SMART |
KH_dom (IPR004087) - T[38-108] 5.1E-16 - T[134-206] 1.9E-14 - T[238-308] 1.6E-15 - T[355-428] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[43-105] 3.3E-17 - T[138-202] 8.7E-13 - T[242-305] 4.9E-15 - T[361-425] 2.4E-14 |
| Pfam |
FUBP_C (IPR015096) - T[620-637] 1.5E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 41.232 % | 275 | 2.69E-83 |
| FUBP2_HUMAN | 35.749 % | 275 | 7.61E-83 |
| FUBP3_HUMAN | 38.757 % | 301 | 3.28E-94 |