- Clone 'cien203441' >
- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C9.38.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v3.A.nonSL6-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,590,667 / 5,600,636]
Amino acid sequence
Length: 628
>KH.C9.38.v3.A.nonSL6-2
PLMHLETHKLTIFLLESTLQTHRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRG
GENIMRMQRETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSN
FNLSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDN
IGQSKPLRITGPQLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGK
GGDMINQIQNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHP
GGMGGFGQWEGPNMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQ
RNPPPGSDLNYKTFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNF
GPPPHQQGGYGGLPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQ
QNGADPTKPVADSSNAAAWQTYLQMYGAQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYL
KQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAWAE
YYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,389
>KH2012:KH.C9.38.v3.A.nonSL6-2
AATTTGTGTAAGAAGAAACAAGTTTCCACAGGCTGTTTTCTTGTAGATGGCCGCCGTGAC
CGCTAATGCATCTGGAGACGCACAAATTGACAATATTTCTGCTGGAGTCGACACTACAAA
CGCACAGAACCTGGCCCAAAGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATA
TAATGTCAGATACGATCAGATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAG
GGGAAAACATAATGCGAATGCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTA
TTCCGGGCACCAAAGAAAGACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGT
GCAGAAATATGTTGAATGAAATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACT
TTAATCTTTCACAAGGTGGCTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCG
AGATCGCTGTCCCACCCGACAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTA
AAATGTTGCAGCAAAGTTTGGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACA
TCGGTCAGAGCAAACCACTGAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTAT
GCATTTTAATGGATTTAGTTTCATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATG
ATGTGAACAAAACCATCATCCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAG
GCGGGGACATGATCAACCAAATCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAG
AGGATCCTACTTTACCTGAACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATG
CTGCTATTAGAAGGATCCATGAGATTATACAGAACGTACAAGAACGTGATGGTCATCCTG
GTGGAATGGGAGGATTTGGCCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCA
TGGGAATGGCATCTGAGGAACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAA
AAGGTGGAGACACCATTAAACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGA
GAAATCCTCCACCTGGTTCAGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTG
AACAAATTAAAATGGCGCGCCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTT
CGAGCAATGGACAGATGCACGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTG
GTCCACCACCACACCAGCAGGGAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGAC
ATCCAAGCCATAACCCATTGCAGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACC
AGCAACCATGGGGTAATCAATTTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGC
AAAACGGTGCTGATCCAACGAAACCTGTGGCTGATTCTAGCAATGCTGCAGCTTGGCAGA
CGTACCTTCAAATGTATGGAGCACAAGCACAAGCATACCAACAACCTGCTGCTGCTGCTG
CAGTTTCCGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGA
AACAGAATGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCG
CTGCTGCTGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCT
CTGCTGCTGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGT
ATTACAGACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTG
CTGGACAAGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATA
TCCAAGATCTGATGATATCGTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGC
CCAGCATTGGGCTTTGTACATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATC
CTGTCAACACTTCGTAAAACTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGT
TACTTGCACCTGTGTTAACCACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCA
GTTCACATCCAGCTCAAACCGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCT
CTTGCTGGCAGTCTTATATGATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGC
ATCGCCGCCGCGTTTTTATTTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[33-115] 2.1E-23 - T[128-208] 1.0E-18 - T[216-325] 3.9E-25 - T[326-394] 2.2E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[39-111] 3.21E-18 - T[133-213] 2.05E-14 - T[223-297] 4.68E-18 - T[320-395] 6.43E-16 |
| SMART |
KH_dom (IPR004087) - T[40-110] 5.1E-16 - T[136-208] 1.3E-12 - T[221-291] 1.6E-15 - T[322-395] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[45-107] 3.1E-17 - T[140-201] 9.5E-12 - T[225-288] 4.6E-15 - T[328-392] 2.3E-14 |
| Pfam |
FUBP_C (IPR015096) - T[587-604] 1.4E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 272 | 9.65E-83 |
| FUBP2_HUMAN | 36.224 % | 275 | 4.81E-83 |
| FUBP3_HUMAN | 38.58 % | 301 | 1.51E-94 |