- Transcript 'KH2012:KH.C9.38.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v3.A.nonSL7-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,590,748 / 5,600,636]
Amino acid sequence
Length: 620
>KH.C9.38.v3.A.nonSL7-2
KLTIFLLESTLQTHRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQ
RETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGL
GGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLR
ITGPQLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQI
QNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQ
WEGPNMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSD
LNYKTFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQQG
GYGGLPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPTK
PVADSSNAAAWQTYLQMYGAQAQAYQQPAAAAAVSAAPASQPDYSKQWDEYLKQNAAAVA
EQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAWAEYYRQYYAM
HGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,308
>KH2012:KH.C9.38.v3.A.nonSL7-2
ACAAATTGACAATATTTCTGCTGGAGTCGACACTACAAACGCACAGAACCTGGCCCAAAG
AAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAGAT
TGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGC
AACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGAC
CATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAA
TAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCT
TGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACA
AGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGG
GGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGA
GGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGTTT
CATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCC
CAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAA
TCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAAC
GTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATG
AGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGGCC
AGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGAAC
ACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAAAC
AAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTCAG
ATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCGCC
AGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCACG
GTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGCAGG
GAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGC
AGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAAT
TTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAACGA
AACCTGTGGCTGATTCTAGCAATGCTGCAGCTTGGCAGACGTACCTTCAAATGTATGGAG
CACAAGCACAAGCATACCAACAACCTGCTGCTGCTGCTGCAGTTTCCGCTGCACCTGCTT
CACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAATGCTGCGGCAGTTG
CAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGCTGCCATTCAACAAC
AACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTGTTCAACCAGCTA
CCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAGACAATACTACGCCA
TGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACAAGCCCCAGCCCCAA
CGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGATCTGATGATATCGT
CTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCATTGGGCTTTGTACAT
ATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAACACTTCGTAAAACT
AACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGCACCTGTGTTAACCA
CCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACATCCAGCTCAAACCG
GTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTGGCAGTCTTATATGA
TCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCGCCGCGTTTTTATTT
TGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[25-107] 2.1E-23 - T[120-200] 9.9E-19 - T[208-317] 3.9E-25 - T[318-386] 2.2E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[31-103] 3.21E-18 - T[125-205] 2.05E-14 - T[215-289] 4.68E-18 - T[312-387] 6.28E-16 |
| SMART |
KH_dom (IPR004087) - T[32-102] 5.1E-16 - T[128-200] 1.3E-12 - T[213-283] 1.6E-15 - T[314-387] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[37-99] 3.0E-17 - T[132-193] 9.3E-12 - T[217-280] 4.5E-15 - T[320-384] 2.2E-14 |
| Pfam |
FUBP_C (IPR015096) - T[579-596] 1.4E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 273 | 6.56E-83 |
| FUBP2_HUMAN | 36.224 % | 275 | 2.62E-83 |
| FUBP3_HUMAN | 38.58 % | 301 | 1.68E-94 |