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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'KH2012:KH.C12.545.v1...' > 
  4. Transcript 'KH2012:KH.C3.110.v1....' > 
  5. Transcript 'KH2012:KH.C9.38.v5.A...'

Transcript Model

Transcript Id

KH2012:KH.C9.38.v5.A.SL3-1

Possible name(s)

FUBP1; FUBP3; KHSRP

Gene model

KH2012:KH.C9.38

Location

KhC9 [5,592,648 / 5,594,606]

Sequences

Amino acid sequence

Length: 180

>KH.C9.38.v5.A.SL3-1
RTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIP
GTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEI
AVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDVCVCM

Nucleotide sequence

Length: 1,099

>KH2012:KH.C9.38.v5.A.SL3-1
AAGAACCTGGCCCAAAGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAAT
GTCAGATACGATCAGATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGA
AAACATAATGCGAATGCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCC
GGGCACCAAAGAAAGACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAG
AAATATGTTGAATGAAATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAA
TCTTTCACAAGGTGGCTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGAT
CGCTGTCCCACCCGACAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAAT
GTTGCAGCAAAGTTTGGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGG
TCAGAGCAAACCACTGAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCAT
GTGAATAGCTTTGACTTAACCGTCTATTACTAGGTTTTCTTACTTTTAGTAGGAGATATA
AGTATTATACTTTTAGTTTAATTGCTAGATCCCACCCCCTCCCCTTGCATGTTGCATGTA
TTTGTTGAAATAATGTCTAAGTGATGAAACTGTAACTTGCCAGTTCTGCTTCTGAAATTT
ATTGATGCTACAAGTTACATAATACTGACAGACATTTTACCAACAATAGTGCTTAATGTC
CATGTAACCTAATGTTCTATTGCACATGGATAATAATGCAAACATATTACTTTACATTTG
GCTTAACCAATATGATGGGTTCAAGTTCCATGAAATGCTTAAAATCATCTGTCTAAATTT
AATGACTTCACGGACAAACTTTCTATTGGCCAATTCCAGTTTCATTAAAAGTAATTTCCG
TAACAGAATGCAGTGAGTGCAGTTCACCAGATGATGGCAAACCGTGACCAACAGATTGCT
CAGCAGAAGATGGAGAGAGATGGAGGCGGCGGTGGTGGACAAGGGGGCATGGATGTAAAT
AAAACCGTACAGGCTTAAT

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[11-93] 2.3E-24 - T[105-180] 9.0E-19
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[17-89] 3.36E-19 - T[110-179] 5.79E-13
SMART
KH_dom (IPR004087) - T[18-88] 5.1E-16 - T[114-178] 3.6E-6
Pfam
KH_dom_type_1 (IPR004088) - T[23-85] 3.9E-18 - T[118-178] 1.8E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FUBP1_HUMAN 43.827 % 132 1.76E-36
FUBP2_HUMAN 44.516 % 130 2.13E-35
FUBP3_HUMAN 42.945 % 127 7.8E-35





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