- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C8.241.v1....' >
- Clone 'cicl026o08' >
- Transcript 'KH2012:KH.C9.38.v6.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v6.A.SL1-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,603 / 5,600,636]
Amino acid sequence
Length: 580
>KH.C9.38.v6.A.SL1-2
GLNLNFVIFRRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETG
CRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMG
DGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGP
QLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVT
GTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQWEGP
NMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYK
TFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQGGYGGL
PPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPISAAPAS
QPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPAT
TQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,202
>KH2012:KH.C9.38.v6.A.SL1-2
AGGTCTTGTGCATTAGGGTTTGAATTTAAACTTTGTCATTTTTAGAAGAACCTGGCCCAA
AGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAG
ATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAAT
GCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAG
ACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGA
AATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGG
CTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGA
CAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTT
GGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACT
GAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGT
TTCATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCAT
CCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCA
AATCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGA
ACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCA
TGAGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGG
CCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGA
ACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAA
ACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTC
AGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCG
CCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCA
CGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGGG
AGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGCA
GGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAATT
TCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAATTTC
CGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAA
TGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGC
TGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGC
TGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAG
ACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACA
AGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGA
TCTGATGATATCGTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCAT
TGGGCTTTGTACATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAA
CACTTCGTAAAACTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGC
ACCTGTGTTAACCACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACA
TCCAGCTCAAACCGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTG
GCAGTCTTATATGATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCG
CCGCGTTTTTATTTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[21-103] 1.9E-23 - T[116-196] 9.0E-19 - T[203-313] 3.4E-25 - T[314-382] 2.0E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[27-99] 2.92E-18 - T[121-201] 1.9E-14 - T[211-285] 4.24E-18 - T[308-383] 5.7E-16 |
| SMART |
KH_dom (IPR004087) - T[28-98] 5.1E-16 - T[124-196] 1.3E-12 - T[209-279] 1.6E-15 - T[310-383] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[33-95] 2.8E-17 - T[128-189] 8.5E-12 - T[213-276] 4.1E-15 - T[316-380] 2.0E-14 |
| Pfam |
FUBP_C (IPR015096) - T[539-556] 1.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 271 | 6.65E-83 |
| FUBP2_HUMAN | 40.934 % | 256 | 1.89E-76 |
| FUBP3_HUMAN | 38.336 % | 312 | 4.51E-99 |