- Transcript 'Boleac.CG.SB_v3.S84....' >
- Transcript 'KH2012:KH.C9.38.v6.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v6.A.SL3-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,648 / 5,600,636]
Amino acid sequence
Length: 570
>KH.C9.38.v6.A.SL3-2
RTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIP
GTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEI
AVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDVCVCI
LMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGKGGDMINQIQNVTGTRVQFKPED
PTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHPGGMGGFGQWEGPNMGRGGRGMG
MASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQ
IKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQGGYGGLPPAAGYGHPS
HNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPISAAPASQPDYSKQWDE
YLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAAAPAASAAVQPATTQAADYSAAW
AEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,157
>KH2012:KH.C9.38.v6.A.SL3-2
AAGAACCTGGCCCAAAGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAAGATATAAT
GTCAGATACGATCAGATTGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGA
AAACATAATGCGAATGCAACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCC
GGGCACCAAAGAAAGACCATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAG
AAATATGTTGAATGAAATAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAA
TCTTTCACAAGGTGGCTTGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGAT
CGCTGTCCCACCCGACAAGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAAT
GTTGCAGCAAAGTTTGGGGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGG
TCAGAGCAAACCACTGAGGATAACTGGTCCACAACTTAATGTTGATGTATGTGTATGCAT
TTTAATGGATTTAGTTTCATCATTTCCCTTTATACAGCCCAATATGTTTGGAGATGATGT
GAACAAAACCATCATCCCAGTTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGG
GGACATGATCAACCAAATCCAAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGA
TCCTACTTTACCTGAACGTATGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGC
TATTAGAAGGATCCATGAGATTATACAGAACGTACAAGAACGTGATGGTCATCCTGGTGG
AATGGGAGGATTTGGCCAGTGGGAAGGACCAAACATGGGTCGGGGTGGTAGAGGCATGGG
AATGGCATCTGAGGAACACTTGGTGCCTGCTAATAAAACTGGACTGGTAATTGGAAAAGG
TGGAGACACCATTAAACAAATCAACATGCAGTCTGGTGCACATGCTGAGATACAGAGAAA
TCCTCCACCTGGTTCAGATCTCAATTACAAAACTTTCATCATCAAAGGCACTCCTGAACA
AATTAAAATGGCGCGCCAGTTGATCCAGGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAG
CAATGGACAGATGCACGGTGGACACATGGGAGGCCAACCACCTATGAGTAACTTTGGTCC
ACCACCACACCAGGGAGGGTATGGTGGTCTCCCACCAGCAGCAGGATATGGACATCCAAG
CCATAACCCATTGCAGGGGCCACCTCAGGCTCCCCAAGCACCACAGTCATACCAGCAACC
ATGGGGTAATCAATTTCAGCAATGGAATTCACCAACTGTGTCCGCTCCACAGCAAAACGG
TGCTGATCCAATTTCCGCTGCACCTGCTTCACAACCAGATTATTCCAAACAATGGGATGA
ATACTTGAAACAGAATGCTGCGGCAGTTGCAGAACAACGTCAACAACTTACTTTGGCCGC
TCCAGCCGCTGCTGCTGCCATTCAACAACAACAGGTAGCTGCTCCAGCTGCTGCTGCACC
GGCTGCCTCTGCTGCTGTTCAACCAGCTACCACTCAGGCGGCTGACTATTCTGCAGCATG
GGCCGAGTATTACAGACAATACTACGCCATGCACGGACAAGCAGGTTATGCGGCTGCTGC
TGCCGCTGCTGGACAAGCCCCAGCCCCAACGTAAACATTTCCAGTATCACTGATCACCAT
TGTAAATATCCAAGATCTGATGATATCGTCTACAACTGAAGTTACATCCCCATAACTTTG
TGGTGCGCCCAGCATTGGGCTTTGTACATATTGTGGTGAACTTTCATTCCTTCAACTCGG
CAGGTATCCTGTCAACACTTCGTAAAACTAACTCGCTTAATTTCTAATTTAAAATGTTAA
TATTAAGTTACTTGCACCTGTGTTAACCACCTGTTGCCCCAACCCTTCTGCGTAATCACA
CATCGGCAGTTCACATCCAGCTCAAACCGGTTCTCCCAATTAGAGAATTCAAAAAAATTT
AAAAGGCTCTTGCTGGCAGTCTTATATGATCCAGTGCTTCTACCTTTGCGTGCGTTTTAC
AAGTTAGCATCGCCGCCGCGTTTTTATTTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[11-93] 1.8E-23 - T[106-186] 8.7E-19 - T[193-303] 3.3E-25 - T[304-372] 1.9E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[17-89] 2.78E-18 - T[111-191] 1.75E-14 - T[201-275] 4.09E-18 - T[298-373] 5.55E-16 |
| SMART |
KH_dom (IPR004087) - T[18-88] 5.1E-16 - T[114-186] 1.3E-12 - T[199-269] 1.6E-15 - T[300-373] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[23-85] 2.7E-17 - T[118-179] 8.3E-12 - T[203-266] 4.0E-15 - T[306-370] 2.0E-14 |
| Pfam |
FUBP_C (IPR015096) - T[529-546] 1.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 272 | 3.93E-83 |
| FUBP2_HUMAN | 40.934 % | 256 | 1.79E-76 |
| FUBP3_HUMAN | 38.309 % | 312 | 3.04E-99 |