- Transcript 'Cisavi.CG.ENS81.R72....' >
- Transcript 'KH2012:KH.C1.218.v1....' >
- Clone 'citb034i11' >
- Clone 'cima878354' >
- Transcript 'KH2012:KH.C9.38.v7.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v7.A.ND4-2
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,590,638 / 5,600,636]
Amino acid sequence
Length: 592
>KH.C9.38.v7.A.ND4-2
PLMHLETHKLTIFLLESTLQTHRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRG
GENIMRMQRETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSN
FNLSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDN
IGQSKPLRITGPQLNVDVCVCILMDLVSSFPFIQPNMFGDDVNKTIIPVPKAAVGVVIGK
GGDMINQIQNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEIIQNVQERDGHP
GGMGGFGQWEGPNMGRGGRGMGMASEEHLVPANKTGLVIGKGGDTIKQINMQSGAHAEIQ
RNPPPGSDLNYKTFIIKGTPEQIKMARQLIQEKVDAGPGGSSNGQMHGGHMGGQPPMSNF
GPPPHQGGYGGLPPAAGYGHPSHNPLQGPPQAPQAPQSYQQPWGNQFQQWNSPTVSAPQQ
NGADPISAAPASQPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAPAAA
APAASAAVQPATTQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,310
>KH2012:KH.C9.38.v7.A.ND4-2
TGTGAACGTTGCTTTAGATTTGTGCAGCCAATTTGTGTAAGAAGAAACAAGTTTCCACAG
GCTGTTTTCTTGTAGATGGCCGCCGTGACCGCTAATGCATCTGGAGACGCACAAATTGAC
AATATTTCTGCTGGAGTCGACACTACAAACGCACAGAACCTGGCCCAAAGAAACTAGCTA
CTCCTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAGATTGCCAGATGA
TCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGCAACGTGAAAC
TGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGACCATGCACACT
GTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAATAATCTCCCG
TTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCTTGGGGGGTAT
GGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACAAGTGTGGTCT
TATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGGGGGTTAAGAT
GTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGAGGATAACTGG
TCCACAACTTAATGTTGATGTATGTGTATGCATTTTAATGGATTTAGTTTCATCATTTCC
CTTTATACAGCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCCCAGTTCCCAA
AGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAATCCAAAACGT
CACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAACGTATGTGCAG
CGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATGAGATTATACA
GAACGTACAAGAACGTGATGGTCATCCTGGTGGAATGGGAGGATTTGGCCAGTGGGAAGG
ACCAAACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGAACACTTGGTGCC
TGCTAATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAAACAAATCAACAT
GCAGTCTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTCAGATCTCAATTA
CAAAACTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCGCCAGTTGATCCA
GGAGAAAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCACGGTGGACACAT
GGGAGGCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGGGAGGGTATGGTGG
TCTCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGCAGGGGCCACCTCA
GGCTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAATTTCAGCAATGGAA
TTCACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAATTTCCGCTGCACCTGC
TTCACAACCAGATTATTCCAAACAATGGGATGAATACTTGAAACAGAATGCTGCGGCAGT
TGCAGAACAACGTCAACAACTTACTTTGGCCGCTCCAGCCGCTGCTGCTGCCATTCAACA
ACAACAGGTAGCTGCTCCAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTGTTCAACCAGC
TACCACTCAGGCGGCTGACTATTCTGCAGCATGGGCCGAGTATTACAGACAATACTACGC
CATGCACGGACAAGCAGGTTATGCGGCTGCTGCTGCCGCTGCTGGACAAGCCCCAGCCCC
AACGTAAACATTTCCAGTATCACTGATCACCATTGTAAATATCCAAGATCTGATGATATC
GTCTACAACTGAAGTTACATCCCCATAACTTTGTGGTGCGCCCAGCATTGGGCTTTGTAC
ATATTGTGGTGAACTTTCATTCCTTCAACTCGGCAGGTATCCTGTCAACACTTCGTAAAA
CTAACTCGCTTAATTTCTAATTTAAAATGTTAATATTAAGTTACTTGCACCTGTGTTAAC
CACCTGTTGCCCCAACCCTTCTGCGTAATCACACATCGGCAGTTCACATCCAGCTCAAAC
CGGTTCTCCCAATTAGAGAATTCAAAAAAATTTAAAAGGCTCTTGCTGGCAGTCTTATAT
GATCCAGTGCTTCTACCTTTGCGTGCGTTTTACAAGTTAGCATCGCCGCCGCGTTTTTAT
TTTGACCTTCCTTTTTTATTAACTGACAAA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[33-115] 1.9E-23 - T[128-208] 9.2E-19 - T[215-325] 3.4E-25 - T[326-394] 2.1E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[39-111] 2.92E-18 - T[133-213] 1.9E-14 - T[223-297] 4.24E-18 - T[320-395] 5.84E-16 |
| SMART |
KH_dom (IPR004087) - T[40-110] 5.1E-16 - T[136-208] 1.3E-12 - T[221-291] 1.6E-15 - T[322-395] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[45-107] 2.9E-17 - T[140-201] 8.7E-12 - T[225-288] 4.2E-15 - T[328-392] 2.1E-14 |
| Pfam |
FUBP_C (IPR015096) - T[551-568] 1.3E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 43.478 % | 271 | 8.81E-83 |
| FUBP2_HUMAN | 40.934 % | 256 | 1.81E-76 |
| FUBP3_HUMAN | 38.336 % | 312 | 5.88E-99 |